RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
PTCD2-210ENST00000515198 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
PTCD2-210ENST00000515198 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
PTCD2-210ENST00000515198 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
PTCD2-210ENST00000515198 SRGNP10124 158 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 MASTLQ96GX5 879 aa16.02■□□□□ 0.16
PTCD2-210ENST00000515198 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.15
PTCD2-210ENST00000515198 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
PTCD2-210ENST00000515198 NPR1P16066 1061 aa16.01■□□□□ 0.15
PTCD2-210ENST00000515198 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
PTCD2-210ENST00000515198 ABCC12Q96J65 1359 aa16■□□□□ 0.15
PTCD2-210ENST00000515198 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
PTCD2-210ENST00000515198 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
PTCD2-210ENST00000515198 TRMT112Q9UI30 125 aaKnown RBP16■□□□□ 0.15
PTCD2-210ENST00000515198 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
PTCD2-210ENST00000515198 SLFN5Q08AF3 891 aa15.99■□□□□ 0.15
PTCD2-210ENST00000515198 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
PTCD2-210ENST00000515198 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
PTCD2-210ENST00000515198 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 RPGRQ92834 1020 aaKnown RBP15.98■□□□□ 0.15
PTCD2-210ENST00000515198 NLRP3Q96P20 1036 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 MYD88Q99836 296 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
PTCD2-210ENST00000515198 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
PTCD2-210ENST00000515198 SLX4Q8IY92 1834 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 FLIIQ13045 1269 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 CRY2Q49AN0 593 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
PTCD2-210ENST00000515198 C21orf2O43822 256 aa15.96■□□□□ 0.15
PTCD2-210ENST00000515198 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
PTCD2-210ENST00000515198 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
PTCD2-210ENST00000515198 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
PTCD2-210ENST00000515198 G2E3Q7L622 706 aa15.96■□□□□ 0.15
PTCD2-210ENST00000515198 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.15
PTCD2-210ENST00000515198 ADCY9O60503 1353 aa15.96■□□□□ 0.15
PTCD2-210ENST00000515198 LAMB2P55268 1798 aa15.95■□□□□ 0.14
PTCD2-210ENST00000515198 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
PTCD2-210ENST00000515198 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
PTCD2-210ENST00000515198 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
PTCD2-210ENST00000515198 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 HSP90B1P14625 803 aaKnown RBP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 HNRNPUQ00839 825 aaKnown RBP eCLIP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
PTCD2-210ENST00000515198 FAM89AQ96GI7 184 aa15.94■□□□□ 0.14
PTCD2-210ENST00000515198 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
PTCD2-210ENST00000515198 SBF1O95248 1867 aa15.93■□□□□ 0.14
PTCD2-210ENST00000515198 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
PTCD2-210ENST00000515198 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
PTCD2-210ENST00000515198 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
PTCD2-210ENST00000515198 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
PTCD2-210ENST00000515198 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
PTCD2-210ENST00000515198 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
PTCD2-210ENST00000515198 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
PTCD2-210ENST00000515198 ZNF784Q8NCA9 323 aaPredicted RBP15.92■□□□□ 0.14
PTCD2-210ENST00000515198 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
PTCD2-210ENST00000515198 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
PTCD2-210ENST00000515198 PCCAP05165 728 aaPredicted RBP15.91■□□□□ 0.14
PTCD2-210ENST00000515198 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
PTCD2-210ENST00000515198 RASSF7Q02833 373 aa15.91■□□□□ 0.14
PTCD2-210ENST00000515198 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
PTCD2-210ENST00000515198 C9orf131Q5VYM1 1079 aa15.91■□□□□ 0.14
PTCD2-210ENST00000515198 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
PTCD2-210ENST00000515198 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
PTCD2-210ENST00000515198 NEURL1BA8MQ27 555 aa15.9■□□□□ 0.14
PTCD2-210ENST00000515198 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
PTCD2-210ENST00000515198 LMNB1P20700 586 aa15.9■□□□□ 0.14
PTCD2-210ENST00000515198 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
PTCD2-210ENST00000515198 C7orf43Q8WVR3 580 aa15.9■□□□□ 0.14
PTCD2-210ENST00000515198 LTBP3Q9NS15 1303 aa15.9■□□□□ 0.14
PTCD2-210ENST00000515198 NFKBIEO00221 500 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 CWF19L2Q2TBE0 894 aaKnown RBP15.89■□□□□ 0.13
PTCD2-210ENST00000515198 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 CC2D2BQ6DHV5 1058 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 RTKN2Q8IZC4 609 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
PTCD2-210ENST00000515198 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 CDHR2Q9BYE9 1310 aa15.89■□□□□ 0.13
PTCD2-210ENST00000515198 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
PTCD2-210ENST00000515198 PDE8AO60658 829 aa15.88■□□□□ 0.13
PTCD2-210ENST00000515198 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
PTCD2-210ENST00000515198 SF3B3Q15393 1217 aaKnown RBP15.88■□□□□ 0.13
PTCD2-210ENST00000515198 GRIPAP1Q4V328 841 aa15.88■□□□□ 0.13
PTCD2-210ENST00000515198 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
PTCD2-210ENST00000515198 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
PTCD2-210ENST00000515198 ABCC4O15439 1325 aa15.88■□□□□ 0.13
PTCD2-210ENST00000515198 F6X3S4 739 aa15.87■□□□□ 0.13
PTCD2-210ENST00000515198 BBOX1O75936 387 aa15.87■□□□□ 0.13
PTCD2-210ENST00000515198 GRAPQ13588 217 aa15.87■□□□□ 0.13
PTCD2-210ENST00000515198 GCKRQ14397 625 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms