RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 SYNE4Q8N205 404 aa16.92■□□□□ 0.3
CDK7-212ENST00000515180 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
CDK7-212ENST00000515180 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
CDK7-212ENST00000515180 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
CDK7-212ENST00000515180 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
CDK7-212ENST00000515180 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
CDK7-212ENST00000515180 FER1L6Q2WGJ9 1857 aa16.91■□□□□ 0.3
CDK7-212ENST00000515180 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
CDK7-212ENST00000515180 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
CDK7-212ENST00000515180 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
CDK7-212ENST00000515180 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
CDK7-212ENST00000515180 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
CDK7-212ENST00000515180 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
CDK7-212ENST00000515180 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
CDK7-212ENST00000515180 HCLS1P14317 486 aaPredicted RBP16.89■□□□□ 0.29
CDK7-212ENST00000515180 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
CDK7-212ENST00000515180 TAOK3Q9H2K8 898 aa16.89■□□□□ 0.29
CDK7-212ENST00000515180 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
CDK7-212ENST00000515180 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
CDK7-212ENST00000515180 SLC10A5Q5PT55 438 aa16.88■□□□□ 0.29
CDK7-212ENST00000515180 ISCA1Q9BUE6 129 aa16.88■□□□□ 0.29
CDK7-212ENST00000515180 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
CDK7-212ENST00000515180 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
CDK7-212ENST00000515180 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
CDK7-212ENST00000515180 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
CDK7-212ENST00000515180 RRAGCQ9HB90 399 aa16.87■□□□□ 0.29
CDK7-212ENST00000515180 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
CDK7-212ENST00000515180 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
CDK7-212ENST00000515180 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
CDK7-212ENST00000515180 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
CDK7-212ENST00000515180 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
CDK7-212ENST00000515180 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
CDK7-212ENST00000515180 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
CDK7-212ENST00000515180 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
CDK7-212ENST00000515180 TIAM2Q8IVF5 1701 aa16.86■□□□□ 0.29
CDK7-212ENST00000515180 IL16Q14005 1332 aa16.86■□□□□ 0.29
CDK7-212ENST00000515180 LTBP3Q9NS15 1303 aa16.86■□□□□ 0.29
CDK7-212ENST00000515180 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 MYD88Q99836 296 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
CDK7-212ENST00000515180 LAMB2P55268 1798 aa16.84■□□□□ 0.29
CDK7-212ENST00000515180 G2E3Q7L622 706 aa16.84■□□□□ 0.29
CDK7-212ENST00000515180 ZNF277Q9NRM2 450 aaPredicted RBP16.84■□□□□ 0.29
CDK7-212ENST00000515180 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
CDK7-212ENST00000515180 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
CDK7-212ENST00000515180 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDK7-212ENST00000515180 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
CDK7-212ENST00000515180 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
CDK7-212ENST00000515180 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
CDK7-212ENST00000515180 ABCC4O15439 1325 aa16.82■□□□□ 0.28
CDK7-212ENST00000515180 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
CDK7-212ENST00000515180 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
CDK7-212ENST00000515180 RTKN2Q8IZC4 609 aa16.82■□□□□ 0.28
CDK7-212ENST00000515180 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
CDK7-212ENST00000515180 MAP3K2Q9Y2U5 619 aa16.82■□□□□ 0.28
CDK7-212ENST00000515180 SNED1Q8TER0 1413 aa16.81■□□□□ 0.28
CDK7-212ENST00000515180 TOMM70O94826 608 aa16.81■□□□□ 0.28
CDK7-212ENST00000515180 TAF1P21675 1872 aa16.81■□□□□ 0.28
CDK7-212ENST00000515180 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
CDK7-212ENST00000515180 VAMP4O75379 141 aa16.8■□□□□ 0.28
CDK7-212ENST00000515180 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CDK7-212ENST00000515180 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
CDK7-212ENST00000515180 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
CDK7-212ENST00000515180 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 POTECB2RU33 542 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
CDK7-212ENST00000515180 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
CDK7-212ENST00000515180 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
CDK7-212ENST00000515180 IARSP41252 1262 aaKnown RBP16.79■□□□□ 0.28
CDK7-212ENST00000515180 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 KSR2Q6VAB6 950 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
CDK7-212ENST00000515180 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
CDK7-212ENST00000515180 CC2D2BQ6DHV5 1058 aa16.78■□□□□ 0.28
CDK7-212ENST00000515180 DDX46Q7L014 1031 aaKnown RBP16.78■□□□□ 0.28
CDK7-212ENST00000515180 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.28
CDK7-212ENST00000515180 PSMD1Q99460 953 aa16.77■□□□□ 0.28
CDK7-212ENST00000515180 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
CDK7-212ENST00000515180 COL4A1P02462 1669 aa16.77■□□□□ 0.28
CDK7-212ENST00000515180 ZNF521Q96K83 1311 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 IGKV5-2P06315 115 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 VEGFAP15692 232 aaPredicted RBP16.76■□□□□ 0.27
CDK7-212ENST00000515180 GRAPQ13588 217 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
CDK7-212ENST00000515180 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
CDK7-212ENST00000515180 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
CDK7-212ENST00000515180 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
CDK7-212ENST00000515180 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
CDK7-212ENST00000515180 COL4A5P29400 1685 aa16.75■□□□□ 0.27
CDK7-212ENST00000515180 BBOX1O75936 387 aa16.75■□□□□ 0.27
CDK7-212ENST00000515180 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
CDK7-212ENST00000515180 HSPA6P17066 643 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms