RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 MBIPQ9NS73 344 aa22.98■■□□□ 1.27
SIL1-215ENST00000515008 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
SIL1-215ENST00000515008 DUSP27Q5VZP5 1158 aa22.96■■□□□ 1.27
SIL1-215ENST00000515008 RTKN2Q8IZC4 609 aa22.96■■□□□ 1.27
SIL1-215ENST00000515008 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
SIL1-215ENST00000515008 HOXA10P31260 410 aaPredicted RBP22.95■■□□□ 1.26
SIL1-215ENST00000515008 AIMP1Q12904 312 aaKnown RBP22.95■■□□□ 1.26
SIL1-215ENST00000515008 DPY19L2Q6NUT2 758 aa22.95■■□□□ 1.26
SIL1-215ENST00000515008 RPGRQ92834 1020 aaKnown RBP22.95■■□□□ 1.26
SIL1-215ENST00000515008 WDR90Q96KV7 1748 aa22.95■■□□□ 1.26
SIL1-215ENST00000515008 UTP14AQ9BVJ6 771 aaKnown RBP22.95■■□□□ 1.26
SIL1-215ENST00000515008 RRAGCQ9HB90 399 aa22.95■■□□□ 1.26
SIL1-215ENST00000515008 ANP32CO43423 234 aa22.94■■□□□ 1.26
SIL1-215ENST00000515008 FKBP4Q02790 459 aaKnown RBP eCLIP22.94■■□□□ 1.26
SIL1-215ENST00000515008 FSTL1Q12841 308 aa22.93■■□□□ 1.26
SIL1-215ENST00000515008 TCIRG1Q13488 830 aa22.93■■□□□ 1.26
SIL1-215ENST00000515008 CCDC184Q52MB2 194 aa22.93■■□□□ 1.26
SIL1-215ENST00000515008 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
SIL1-215ENST00000515008 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
SIL1-215ENST00000515008 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
SIL1-215ENST00000515008 SLC10A5Q5PT55 438 aa22.92■■□□□ 1.26
SIL1-215ENST00000515008 NLRP10Q86W26 655 aa22.92■■□□□ 1.26
SIL1-215ENST00000515008 PLBD2Q8NHP8 589 aa22.92■■□□□ 1.26
SIL1-215ENST00000515008 RBM17Q96I25 401 aaKnown RBP22.92■■□□□ 1.26
SIL1-215ENST00000515008 NLRP3Q96P20 1036 aa22.92■■□□□ 1.26
SIL1-215ENST00000515008 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
SIL1-215ENST00000515008 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
SIL1-215ENST00000515008 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
SIL1-215ENST00000515008 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
SIL1-215ENST00000515008 CHMP4AQ9BY43 222 aa22.91■■□□□ 1.26
SIL1-215ENST00000515008 APLP1P51693 650 aa22.9■■□□□ 1.26
SIL1-215ENST00000515008 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
SIL1-215ENST00000515008 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
SIL1-215ENST00000515008 ANKRD13DQ6ZTN6 518 aa22.89■■□□□ 1.25
SIL1-215ENST00000515008 PSMD1Q99460 953 aa22.89■■□□□ 1.25
SIL1-215ENST00000515008 CEP350Q5VT06 3117 aa22.88■■□□□ 1.25
SIL1-215ENST00000515008 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
SIL1-215ENST00000515008 SMC1BQ8NDV3 1235 aa22.88■■□□□ 1.25
SIL1-215ENST00000515008 LAMB2P55268 1798 aa22.88■■□□□ 1.25
SIL1-215ENST00000515008 SH3TC1Q8TE82 1336 aa22.87■■□□□ 1.25
SIL1-215ENST00000515008 C3orf67Q6ZVT6 689 aa22.87■■□□□ 1.25
SIL1-215ENST00000515008 ZNF277Q9NRM2 450 aaPredicted RBP22.87■■□□□ 1.25
SIL1-215ENST00000515008 TRMT112Q9UI30 125 aaKnown RBP22.87■■□□□ 1.25
SIL1-215ENST00000515008 PPEF1O14829 653 aaPredicted RBP22.86■■□□□ 1.25
SIL1-215ENST00000515008 IARSP41252 1262 aaKnown RBP22.85■■□□□ 1.25
SIL1-215ENST00000515008 SYNE4Q8N205 404 aa22.85■■□□□ 1.25
SIL1-215ENST00000515008 ISCA1Q9BUE6 129 aa22.85■■□□□ 1.25
SIL1-215ENST00000515008 POTECB2RU33 542 aa22.84■■□□□ 1.25
SIL1-215ENST00000515008 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
SIL1-215ENST00000515008 WWC1Q8IX03 1113 aa22.84■■□□□ 1.25
SIL1-215ENST00000515008 IL16Q14005 1332 aa22.83■■□□□ 1.25
SIL1-215ENST00000515008 SCN4AP35499 1836 aa22.83■■□□□ 1.25
SIL1-215ENST00000515008 TRIM28Q13263 835 aaKnown RBP22.83■■□□□ 1.25
SIL1-215ENST00000515008 CCDC30Q5VVM6 783 aa22.83■■□□□ 1.25
SIL1-215ENST00000515008 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.25
SIL1-215ENST00000515008 L3MBTL3Q96JM7 780 aaPredicted RBP22.83■■□□□ 1.25
SIL1-215ENST00000515008 TMX4Q9H1E5 349 aaPredicted RBP22.83■■□□□ 1.25
SIL1-215ENST00000515008 ABCC4O15439 1325 aa22.82■■□□□ 1.24
SIL1-215ENST00000515008 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
SIL1-215ENST00000515008 ELL2O00472 640 aaPredicted RBP22.82■■□□□ 1.24
SIL1-215ENST00000515008 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
SIL1-215ENST00000515008 HCLS1P14317 486 aaPredicted RBP22.82■■□□□ 1.24
SIL1-215ENST00000515008 IQCA1LA6NCM1 817 aa22.81■■□□□ 1.24
SIL1-215ENST00000515008 ATP6V0A2Q9Y487 856 aa22.81■■□□□ 1.24
SIL1-215ENST00000515008 FZD9O00144 591 aa22.8■■□□□ 1.24
SIL1-215ENST00000515008 BBOX1O75936 387 aa22.8■■□□□ 1.24
SIL1-215ENST00000515008 DDX46Q7L014 1031 aaKnown RBP22.8■■□□□ 1.24
SIL1-215ENST00000515008 RIC3Q7Z5B4 369 aa22.8■■□□□ 1.24
SIL1-215ENST00000515008 JDP2Q8WYK2 163 aa22.8■■□□□ 1.24
SIL1-215ENST00000515008 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
SIL1-215ENST00000515008 ATP5J2-PTCD1G3V325 749 aa22.79■■□□□ 1.24
SIL1-215ENST00000515008 PHAXQ9H814 394 aaKnown RBP22.79■■□□□ 1.24
SIL1-215ENST00000515008 DDX58O95786 925 aaKnown RBP22.78■■□□□ 1.24
SIL1-215ENST00000515008 GRAPQ13588 217 aa22.78■■□□□ 1.24
SIL1-215ENST00000515008 TMC4Q7Z404 712 aa22.78■■□□□ 1.24
SIL1-215ENST00000515008 GRAPLQ8TC17 118 aaPredicted RBP22.78■■□□□ 1.24
SIL1-215ENST00000515008 TSR2Q969E8 191 aaKnown RBP22.78■■□□□ 1.24
SIL1-215ENST00000515008 VPS33BQ9H267 617 aa22.78■■□□□ 1.24
SIL1-215ENST00000515008 HSP90B1P14625 803 aaKnown RBP22.77■■□□□ 1.24
SIL1-215ENST00000515008 TSPYL6Q8N831 410 aa22.77■■□□□ 1.24
SIL1-215ENST00000515008 SF3B3Q15393 1217 aaKnown RBP22.76■■□□□ 1.23
SIL1-215ENST00000515008 SP8Q8IXZ3 490 aa22.76■■□□□ 1.23
SIL1-215ENST00000515008 SUPT20HQ8NEM7 779 aa22.76■■□□□ 1.23
SIL1-215ENST00000515008 FAM89AQ96GI7 184 aa22.76■■□□□ 1.23
SIL1-215ENST00000515008 LRRC37AA6NMS7 1700 aa22.76■■□□□ 1.23
SIL1-215ENST00000515008 COL4A5P29400 1685 aa22.75■■□□□ 1.23
SIL1-215ENST00000515008 TCERG1O14776 1098 aaKnown RBP22.75■■□□□ 1.23
SIL1-215ENST00000515008 EIF6P56537 245 aaKnown RBP22.75■■□□□ 1.23
SIL1-215ENST00000515008 GPC2Q8N158 579 aa22.75■■□□□ 1.23
SIL1-215ENST00000515008 LARGE2Q8N3Y3 721 aa22.75■■□□□ 1.23
SIL1-215ENST00000515008 STK31Q9BXU1 1019 aa22.75■■□□□ 1.23
SIL1-215ENST00000515008 RTFDC1Q9BY42 306 aaPredicted RBP22.75■■□□□ 1.23
SIL1-215ENST00000515008 TWISTNBQ3B726 338 aaPredicted RBP22.74■■□□□ 1.23
SIL1-215ENST00000515008 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
SIL1-215ENST00000515008 ZBTB38Q8NAP3 1195 aaPredicted RBP22.74■■□□□ 1.23
SIL1-215ENST00000515008 CCDC191Q8NCU4 936 aa22.74■■□□□ 1.23
SIL1-215ENST00000515008 TAF1DQ9H5J8 278 aaPredicted RBP22.74■■□□□ 1.23
SIL1-215ENST00000515008 CACNA1FO60840 1977 aa22.73■■□□□ 1.23
SIL1-215ENST00000515008 IRS4O14654 1257 aaPredicted RBP22.73■■□□□ 1.23
SIL1-215ENST00000515008 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms