RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CLDN10P78369 228 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 TBC1D8BQ0IIM8 1120 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 USP17L1Q7RTZ2 530 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 TXNRD3Q86VQ6 643 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 STAG2Q8N3U4 1231 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 GAS2L2Q8NHY3 880 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
NEDD4-211ENST00000514893 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
NEDD4-211ENST00000514893 SELPP16109 830 aa9.18□□□□□ -0.94
NEDD4-211ENST00000514893 MBTPS1Q14703 1052 aa9.18□□□□□ -0.94
NEDD4-211ENST00000514893 BTLAQ7Z6A9 289 aa9.18□□□□□ -0.94
NEDD4-211ENST00000514893 ALDH16A1Q8IZ83 802 aa9.18□□□□□ -0.94
NEDD4-211ENST00000514893 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
NEDD4-211ENST00000514893 SLC6A14Q9UN76 642 aa9.18□□□□□ -0.94
NEDD4-211ENST00000514893 ATAD2Q6PL18 1390 aa9.17□□□□□ -0.94
NEDD4-211ENST00000514893 PCSK7Q16549 785 aa9.17□□□□□ -0.94
NEDD4-211ENST00000514893 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
NEDD4-211ENST00000514893 PNMA5Q96PV4 448 aa9.17□□□□□ -0.94
NEDD4-211ENST00000514893 ATP9BO43861 1147 aa9.16□□□□□ -0.94
NEDD4-211ENST00000514893 SIX5Q8N196 739 aa9.16□□□□□ -0.94
NEDD4-211ENST00000514893 NUDT8Q8WV74 236 aa9.16□□□□□ -0.94
NEDD4-211ENST00000514893 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
NEDD4-211ENST00000514893 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
NEDD4-211ENST00000514893 RGS9O75916 674 aaPredicted RBP9.15□□□□□ -0.94
NEDD4-211ENST00000514893 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
NEDD4-211ENST00000514893 AFF1P51825 1210 aaKnown RBP9.14□□□□□ -0.95
NEDD4-211ENST00000514893 CCINQ13939 588 aa9.14□□□□□ -0.95
NEDD4-211ENST00000514893 TP53INP1Q96A56 240 aa9.14□□□□□ -0.95
NEDD4-211ENST00000514893 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
NEDD4-211ENST00000514893 C2orf49Q9BVC5 232 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-211ENST00000514893 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
NEDD4-211ENST00000514893 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
NEDD4-211ENST00000514893 USP21Q9UK80 565 aa9.14□□□□□ -0.95
NEDD4-211ENST00000514893 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-211ENST00000514893 C21orf2O43822 256 aa9.13□□□□□ -0.95
NEDD4-211ENST00000514893 FLIIQ13045 1269 aa9.13□□□□□ -0.95
NEDD4-211ENST00000514893 PSAPL1Q6NUJ1 521 aa9.13□□□□□ -0.95
NEDD4-211ENST00000514893 LRP8Q14114 963 aa9.12□□□□□ -0.95
NEDD4-211ENST00000514893 IER5Q5VY09 327 aa9.12□□□□□ -0.95
NEDD4-211ENST00000514893 DMRTC2Q8IXT2 367 aaPredicted RBP9.12□□□□□ -0.95
NEDD4-211ENST00000514893 CHMP7Q8WUX9 453 aaPredicted RBP9.12□□□□□ -0.95
NEDD4-211ENST00000514893 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
NEDD4-211ENST00000514893 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
NEDD4-211ENST00000514893 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
NEDD4-211ENST00000514893 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 POM121CA8CG34 1229 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
NEDD4-211ENST00000514893 SEC13P55735 322 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 FMR1NBQ8N0W7 255 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-211ENST00000514893 DTWD1Q8N5C7 304 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
NEDD4-211ENST00000514893 EPB42P16452 691 aa9.1□□□□□ -0.95
NEDD4-211ENST00000514893 RASA1P20936 1047 aa9.1□□□□□ -0.95
NEDD4-211ENST00000514893 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
NEDD4-211ENST00000514893 HYAL3O43820 417 aaPredicted RBP9.09□□□□□ -0.95
NEDD4-211ENST00000514893 DKK1O94907 266 aa9.09□□□□□ -0.95
NEDD4-211ENST00000514893 NFKB1P19838 968 aa9.09□□□□□ -0.95
NEDD4-211ENST00000514893 RTN1Q16799 776 aa9.09□□□□□ -0.95
NEDD4-211ENST00000514893 ILDR2Q71H61 639 aa9.09□□□□□ -0.95
NEDD4-211ENST00000514893 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
NEDD4-211ENST00000514893 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 MSL1Q68DK7 614 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 FBXO11Q86XK2 927 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 C11orf16Q9NQ32 467 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 FRRS1LQ9P0K9 344 aa9.08□□□□□ -0.96
NEDD4-211ENST00000514893 LARP1Q6PKG0 1096 aaKnown RBP9.07□□□□□ -0.96
NEDD4-211ENST00000514893 SSBP4Q9BWG4 385 aaPredicted RBP9.07□□□□□ -0.96
NEDD4-211ENST00000514893 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
NEDD4-211ENST00000514893 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
NEDD4-211ENST00000514893 WFDC12Q8WWY7 111 aa9.06□□□□□ -0.96
NEDD4-211ENST00000514893 CPB1P15086 417 aa9.05□□□□□ -0.96
NEDD4-211ENST00000514893 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
NEDD4-211ENST00000514893 TTC9Q92623 222 aa9.05□□□□□ -0.96
NEDD4-211ENST00000514893 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
NEDD4-211ENST00000514893 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
NEDD4-211ENST00000514893 NAGPAQ9UK23 515 aa9.05□□□□□ -0.96
NEDD4-211ENST00000514893 WFDC8Q8IUA0 241 aa9.04□□□□□ -0.96
NEDD4-211ENST00000514893 IGFBP4P22692 258 aa9.03□□□□□ -0.96
NEDD4-211ENST00000514893 INPP5BP32019 993 aa9.03□□□□□ -0.96
NEDD4-211ENST00000514893 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
NEDD4-211ENST00000514893 SLC51AQ86UW1 340 aa9.03□□□□□ -0.96
NEDD4-211ENST00000514893 TRPM4Q8TD43 1214 aa9.03□□□□□ -0.96
NEDD4-211ENST00000514893 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
NEDD4-211ENST00000514893 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
NEDD4-211ENST00000514893 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
NEDD4-211ENST00000514893 RNF112Q9ULX5 631 aa9.02□□□□□ -0.97
NEDD4-211ENST00000514893 PERM1Q5SV97 790 aa9.01□□□□□ -0.97
NEDD4-211ENST00000514893 ZBTB42B2RXF5 422 aa9□□□□□ -0.97
NEDD4-211ENST00000514893 NOS3P29474 1203 aa9□□□□□ -0.97
NEDD4-211ENST00000514893 IDH3AP50213 366 aa9□□□□□ -0.97
NEDD4-211ENST00000514893 ARSDP51689 593 aa9□□□□□ -0.97
NEDD4-211ENST00000514893 GRIK5Q16478 980 aa9□□□□□ -0.97
NEDD4-211ENST00000514893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.977e-8■■■■■ 186.3
NEDD4-211ENST00000514893 TARSP26639 723 aaKnown RBP8.99□□□□□ -0.97
NEDD4-211ENST00000514893 KRT25Q7Z3Z0 450 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms