RNA–Protein interactions for RNA: ENST00000514285.1

SERF1B-207, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-207ENST00000514285 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
SERF1B-207ENST00000514285 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
SERF1B-207ENST00000514285 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
SERF1B-207ENST00000514285 CRY2Q49AN0 593 aa18.77■□□□□ 0.6
SERF1B-207ENST00000514285 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
SERF1B-207ENST00000514285 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
SERF1B-207ENST00000514285 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
SERF1B-207ENST00000514285 ISCA1Q9BUE6 129 aa18.76■□□□□ 0.59
SERF1B-207ENST00000514285 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
SERF1B-207ENST00000514285 VAMP4O75379 141 aa18.74■□□□□ 0.59
SERF1B-207ENST00000514285 TRIM28Q13263 835 aaKnown RBP18.74■□□□□ 0.59
SERF1B-207ENST00000514285 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
SERF1B-207ENST00000514285 TRMT112Q9UI30 125 aaKnown RBP18.74■□□□□ 0.59
SERF1B-207ENST00000514285 SLX4Q8IY92 1834 aa18.74■□□□□ 0.59
SERF1B-207ENST00000514285 CACNA1SQ13698 1873 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 E9PSI1 815 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 C21orf2O43822 256 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 SLC10A5Q5PT55 438 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 MIER1Q8N108 512 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
SERF1B-207ENST00000514285 NLRP3Q96P20 1036 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 CACNA1FO60840 1977 aa18.73■□□□□ 0.59
SERF1B-207ENST00000514285 ATP5J2-PTCD1G3V325 749 aa18.72■□□□□ 0.59
SERF1B-207ENST00000514285 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
SERF1B-207ENST00000514285 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
SERF1B-207ENST00000514285 RASSF7Q02833 373 aa18.72■□□□□ 0.59
SERF1B-207ENST00000514285 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
SERF1B-207ENST00000514285 HOXA10P31260 410 aaPredicted RBP18.71■□□□□ 0.59
SERF1B-207ENST00000514285 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
SERF1B-207ENST00000514285 MYD88Q99836 296 aa18.71■□□□□ 0.59
SERF1B-207ENST00000514285 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
SERF1B-207ENST00000514285 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
SERF1B-207ENST00000514285 NFKBIEO00221 500 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 SBF1O95248 1867 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 LMNB1P20700 586 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 FLIIQ13045 1269 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
SERF1B-207ENST00000514285 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 LTBP3Q9NS15 1303 aa18.7■□□□□ 0.58
SERF1B-207ENST00000514285 PI4KAP2A4QPH2 592 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 HCLS1P14317 486 aaPredicted RBP18.69■□□□□ 0.58
SERF1B-207ENST00000514285 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 G2E3Q7L622 706 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 PI4KAP1Q8N8J0 262 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 TAOK3Q9H2K8 898 aa18.69■□□□□ 0.58
SERF1B-207ENST00000514285 NEXNQ0ZGT2 675 aa18.68■□□□□ 0.58
SERF1B-207ENST00000514285 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
SERF1B-207ENST00000514285 FAM89AQ96GI7 184 aa18.68■□□□□ 0.58
SERF1B-207ENST00000514285 CWC25Q9NXE8 425 aaPredicted RBP18.68■□□□□ 0.58
SERF1B-207ENST00000514285 ZC3H4Q9UPT8 1303 aaKnown RBP18.68■□□□□ 0.58
SERF1B-207ENST00000514285 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
SERF1B-207ENST00000514285 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
SERF1B-207ENST00000514285 FKBP5Q13451 457 aaPredicted RBP18.67■□□□□ 0.58
SERF1B-207ENST00000514285 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
SERF1B-207ENST00000514285 DDX60Q8IY21 1712 aaKnown RBP18.66■□□□□ 0.58
SERF1B-207ENST00000514285 LAMB2P55268 1798 aa18.66■□□□□ 0.58
SERF1B-207ENST00000514285 ZNF428Q96B54 188 aa18.66■□□□□ 0.58
SERF1B-207ENST00000514285 GPBP1L1Q9HC44 474 aaPredicted RBP18.66■□□□□ 0.58
SERF1B-207ENST00000514285 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
SERF1B-207ENST00000514285 PRELPP51888 382 aa18.65■□□□□ 0.58
SERF1B-207ENST00000514285 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
SERF1B-207ENST00000514285 RTKN2Q8IZC4 609 aa18.65■□□□□ 0.58
SERF1B-207ENST00000514285 ABCC4O15439 1325 aa18.65■□□□□ 0.58
SERF1B-207ENST00000514285 PPEF1O14829 653 aaPredicted RBP18.64■□□□□ 0.57
SERF1B-207ENST00000514285 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.57
SERF1B-207ENST00000514285 IGKV5-2P06315 115 aa18.64■□□□□ 0.57
SERF1B-207ENST00000514285 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
SERF1B-207ENST00000514285 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
SERF1B-207ENST00000514285 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
SERF1B-207ENST00000514285 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
SERF1B-207ENST00000514285 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
SERF1B-207ENST00000514285 DNAAF4Q8WXU2 420 aa18.63■□□□□ 0.57
SERF1B-207ENST00000514285 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SERF1B-207ENST00000514285 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
SERF1B-207ENST00000514285 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
SERF1B-207ENST00000514285 NEURL1BA8MQ27 555 aa18.62■□□□□ 0.57
SERF1B-207ENST00000514285 GRAPQ13588 217 aa18.62■□□□□ 0.57
SERF1B-207ENST00000514285 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
SERF1B-207ENST00000514285 OLFM4Q6UX06 510 aa18.62■□□□□ 0.57
SERF1B-207ENST00000514285 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
SERF1B-207ENST00000514285 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
SERF1B-207ENST00000514285 CCDC88AQ3V6T2 1871 aa18.62■□□□□ 0.57
SERF1B-207ENST00000514285 DICER1Q9UPY3 1922 aaKnown RBP18.61■□□□□ 0.57
SERF1B-207ENST00000514285 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
SERF1B-207ENST00000514285 BBOX1O75936 387 aa18.61■□□□□ 0.57
SERF1B-207ENST00000514285 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
SERF1B-207ENST00000514285 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
SERF1B-207ENST00000514285 PSMD1Q99460 953 aa18.61■□□□□ 0.57
SERF1B-207ENST00000514285 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
SERF1B-207ENST00000514285 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
SERF1B-207ENST00000514285 LINS1Q8NG48 757 aa18.6■□□□□ 0.57
SERF1B-207ENST00000514285 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
SERF1B-207ENST00000514285 PDE8AO60658 829 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms