RNA–Protein interactions for RNA: ENST00000514248.1

ZFYVE28-209, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 3

Gene ZFYVE28, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-209ENST00000514248 E9PSI1 815 aa20.3■□□□□ 0.84
ZFYVE28-209ENST00000514248 CNKSR1Q969H4 720 aa20.3■□□□□ 0.84
ZFYVE28-209ENST00000514248 ARFGEF1Q9Y6D6 1849 aa20.3■□□□□ 0.84
ZFYVE28-209ENST00000514248 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
ZFYVE28-209ENST00000514248 ARFGEF2Q9Y6D5 1785 aa20.29■□□□□ 0.84
ZFYVE28-209ENST00000514248 VAMP4O75379 141 aa20.29■□□□□ 0.84
ZFYVE28-209ENST00000514248 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
ZFYVE28-209ENST00000514248 NPR1P16066 1061 aa20.29■□□□□ 0.84
ZFYVE28-209ENST00000514248 TRMT112Q9UI30 125 aaKnown RBP20.28■□□□□ 0.84
ZFYVE28-209ENST00000514248 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
ZFYVE28-209ENST00000514248 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
ZFYVE28-209ENST00000514248 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
ZFYVE28-209ENST00000514248 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
ZFYVE28-209ENST00000514248 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
ZFYVE28-209ENST00000514248 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
ZFYVE28-209ENST00000514248 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
ZFYVE28-209ENST00000514248 KSR2Q6VAB6 950 aa20.25■□□□□ 0.83
ZFYVE28-209ENST00000514248 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
ZFYVE28-209ENST00000514248 MYD88Q99836 296 aa20.25■□□□□ 0.83
ZFYVE28-209ENST00000514248 MAP3K2Q9Y2U5 619 aa20.25■□□□□ 0.83
ZFYVE28-209ENST00000514248 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 C21orf2O43822 256 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 ALDH1B1P30837 517 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 FLIIQ13045 1269 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 SLC10A5Q5PT55 438 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 G2E3Q7L622 706 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 METTL22Q9BUU2 404 aaPredicted RBP20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 ZNF219Q9P2Y4 722 aaPredicted RBP20.24■□□□□ 0.83
ZFYVE28-209ENST00000514248 ADCY9O60503 1353 aa20.23■□□□□ 0.83
ZFYVE28-209ENST00000514248 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
ZFYVE28-209ENST00000514248 FKBP5Q13451 457 aaPredicted RBP20.23■□□□□ 0.83
ZFYVE28-209ENST00000514248 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
ZFYVE28-209ENST00000514248 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
ZFYVE28-209ENST00000514248 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 HOXA10P31260 410 aaPredicted RBP20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 CWC25Q9NXE8 425 aaPredicted RBP20.21■□□□□ 0.83
ZFYVE28-209ENST00000514248 RASSF7Q02833 373 aa20.2■□□□□ 0.82
ZFYVE28-209ENST00000514248 C3orf67Q6ZVT6 689 aa20.2■□□□□ 0.82
ZFYVE28-209ENST00000514248 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
ZFYVE28-209ENST00000514248 HSP90B1P14625 803 aaKnown RBP20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 CCDC93Q567U6 631 aa20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 C9orf131Q5VYM1 1079 aa20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
ZFYVE28-209ENST00000514248 NFKBIEO00221 500 aa20.18■□□□□ 0.82
ZFYVE28-209ENST00000514248 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
ZFYVE28-209ENST00000514248 IRS4O14654 1257 aaPredicted RBP20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 LMNB1P20700 586 aa20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 SLX4Q8IY92 1834 aa20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
ZFYVE28-209ENST00000514248 IGKV5-2P06315 115 aa20.16■□□□□ 0.82
ZFYVE28-209ENST00000514248 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
ZFYVE28-209ENST00000514248 TRMT2AQ8IZ69 625 aaKnown RBP20.16■□□□□ 0.82
ZFYVE28-209ENST00000514248 C7orf43Q8WVR3 580 aa20.16■□□□□ 0.82
ZFYVE28-209ENST00000514248 LTBP3Q9NS15 1303 aa20.16■□□□□ 0.82
ZFYVE28-209ENST00000514248 PPEF1O14829 653 aaPredicted RBP20.15■□□□□ 0.82
ZFYVE28-209ENST00000514248 CWF19L2Q2TBE0 894 aaKnown RBP20.15■□□□□ 0.82
ZFYVE28-209ENST00000514248 ABCC4O15439 1325 aa20.15■□□□□ 0.82
ZFYVE28-209ENST00000514248 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
ZFYVE28-209ENST00000514248 LAMB2P55268 1798 aa20.15■□□□□ 0.82
ZFYVE28-209ENST00000514248 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
ZFYVE28-209ENST00000514248 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
ZFYVE28-209ENST00000514248 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
ZFYVE28-209ENST00000514248 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
ZFYVE28-209ENST00000514248 TMX4Q9H1E5 349 aaPredicted RBP20.14■□□□□ 0.81
ZFYVE28-209ENST00000514248 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
ZFYVE28-209ENST00000514248 CT47B1P0C2W7 299 aaPredicted RBP20.13■□□□□ 0.81
ZFYVE28-209ENST00000514248 SF3B3Q15393 1217 aaKnown RBP20.13■□□□□ 0.81
ZFYVE28-209ENST00000514248 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
ZFYVE28-209ENST00000514248 CDHR2Q9BYE9 1310 aa20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 FKBP4Q02790 459 aaKnown RBP eCLIP20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 GRIPAP1Q4V328 841 aa20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 GPBP1L1Q9HC44 474 aaPredicted RBP20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 CACNA1FO60840 1977 aa20.12■□□□□ 0.81
ZFYVE28-209ENST00000514248 F6X3S4 739 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 PDE8AO60658 829 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 BBOX1O75936 387 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 GRAPQ13588 217 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 ALDH1L2Q3SY69 923 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 SSH1Q8WYL5 1049 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
ZFYVE28-209ENST00000514248 PTPRCP08575 1304 aa20.1■□□□□ 0.81
ZFYVE28-209ENST00000514248 PRELPP51888 382 aa20.1■□□□□ 0.81
ZFYVE28-209ENST00000514248 GCKRQ14397 625 aa20.1■□□□□ 0.81
ZFYVE28-209ENST00000514248 UBE3BQ7Z3V4 1068 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms