RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 PROSER3Q2NL68 480 aa15.16■□□□□ 0.02
SMAD1-212ENST00000514168 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
SMAD1-212ENST00000514168 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
SMAD1-212ENST00000514168 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
SMAD1-212ENST00000514168 BCL2L13Q9BXK5 485 aa15.16■□□□□ 0.02
SMAD1-212ENST00000514168 A0A087WZG4 1122 aa15.15■□□□□ 0.02
SMAD1-212ENST00000514168 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
SMAD1-212ENST00000514168 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
SMAD1-212ENST00000514168 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
SMAD1-212ENST00000514168 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
SMAD1-212ENST00000514168 C21orf2O43822 256 aa15.14■□□□□ 0.01
SMAD1-212ENST00000514168 BCAR3O75815 825 aa15.14■□□□□ 0.01
SMAD1-212ENST00000514168 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
SMAD1-212ENST00000514168 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
SMAD1-212ENST00000514168 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
SMAD1-212ENST00000514168 AIMP1Q12904 312 aaKnown RBP15.13■□□□□ 0.01
SMAD1-212ENST00000514168 COPS6Q7L5N1 327 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 G2E3Q7L622 706 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 SCN4AP35499 1836 aa15.13■□□□□ 0.01
SMAD1-212ENST00000514168 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
SMAD1-212ENST00000514168 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
SMAD1-212ENST00000514168 SRGNP10124 158 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 PDE6BP35913 854 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 FLIIQ13045 1269 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMAD1-212ENST00000514168 NUP98P52948 1817 aa15.12■□□□□ 0.01
SMAD1-212ENST00000514168 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
SMAD1-212ENST00000514168 IPO8O15397 1037 aaKnown RBP15.11■□□□□ 0.01
SMAD1-212ENST00000514168 DDX58O95786 925 aaKnown RBP15.11■□□□□ 0.01
SMAD1-212ENST00000514168 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
SMAD1-212ENST00000514168 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
SMAD1-212ENST00000514168 DZIP3Q86Y13 1208 aaKnown RBP15.11■□□□□ 0.01
SMAD1-212ENST00000514168 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
SMAD1-212ENST00000514168 PTPRCP08575 1304 aa15.11■□□□□ 0.01
SMAD1-212ENST00000514168 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
SMAD1-212ENST00000514168 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
SMAD1-212ENST00000514168 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
SMAD1-212ENST00000514168 FRAT1Q92837 279 aaPredicted RBP15.1■□□□□ 0.01
SMAD1-212ENST00000514168 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
SMAD1-212ENST00000514168 ANKRD36CQ5JPF3 1778 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 DDNO94850 711 aaPredicted RBP15.09■□□□□ 0.01
SMAD1-212ENST00000514168 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 DPY19L2Q6NUT2 758 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
SMAD1-212ENST00000514168 ANKRD13DQ6ZTN6 518 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 TNS4Q8IZW8 715 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
SMAD1-212ENST00000514168 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 PLBD2Q8NHP8 589 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 MAP3K15Q6ZN16 1313 aa15.09■□□□□ 0.01
SMAD1-212ENST00000514168 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
SMAD1-212ENST00000514168 ERVV-1B6SEH8 477 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 KSR2Q6VAB6 950 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 CNKSR1Q969H4 720 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 SETDB2Q96T68 719 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
SMAD1-212ENST00000514168 SNED1Q8TER0 1413 aa15.08■□□□□ 0
SMAD1-212ENST00000514168 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 CHADLQ6NUI6 762 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 ATF7IPQ6VMQ6 1270 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 MASTLQ96GX5 879 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 L3MBTL3Q96JM7 780 aaPredicted RBP15.07■□□□□ 0
SMAD1-212ENST00000514168 ZBTB3Q9H5J0 574 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 CREBZFQ9NS37 354 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 PASKQ96RG2 1323 aa15.07■□□□□ 0
SMAD1-212ENST00000514168 RGL2O15211 777 aa15.06■□□□□ 0
SMAD1-212ENST00000514168 CAPN15O75808 1086 aa15.06■□□□□ 0
SMAD1-212ENST00000514168 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
SMAD1-212ENST00000514168 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
SMAD1-212ENST00000514168 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
SMAD1-212ENST00000514168 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
SMAD1-212ENST00000514168 MS4A1P11836 297 aa15.05■□□□□ -0
SMAD1-212ENST00000514168 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
SMAD1-212ENST00000514168 DNAAF4Q8WXU2 420 aa15.05■□□□□ -0
SMAD1-212ENST00000514168 F6X3S4 739 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 PLIN1O60240 522 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 TRIM27P14373 513 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
SMAD1-212ENST00000514168 ST5P78524 1137 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 NEXNQ0ZGT2 675 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 HLFQ16534 295 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 OLFM4Q6UX06 510 aa15.04■□□□□ -0
SMAD1-212ENST00000514168 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
SMAD1-212ENST00000514168 TAF1DQ9H5J8 278 aaPredicted RBP15.04■□□□□ -0
SMAD1-212ENST00000514168 COL4A5P29400 1685 aa15.03■□□□□ -0
SMAD1-212ENST00000514168 CNTNAP1P78357 1384 aa15.03■□□□□ -0
SMAD1-212ENST00000514168 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
SMAD1-212ENST00000514168 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
SMAD1-212ENST00000514168 ITGBL1O95965 494 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms