RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 LMOD3Q0VAK6 560 aa19.56■□□□□ 0.72
SGCA-210ENST00000513942 NFE2L2Q16236 605 aa19.56■□□□□ 0.72
SGCA-210ENST00000513942 PNMA8AQ86V59 439 aaPredicted RBP19.56■□□□□ 0.72
SGCA-210ENST00000513942 PHACTR3Q96KR7 559 aa19.56■□□□□ 0.72
SGCA-210ENST00000513942 RASSF10A6NK89 507 aa19.55■□□□□ 0.72
SGCA-210ENST00000513942 FAM177BA6PVY3 158 aa19.55■□□□□ 0.72
SGCA-210ENST00000513942 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
SGCA-210ENST00000513942 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
SGCA-210ENST00000513942 MAP1SQ66K74 1059 aaPredicted RBP19.55■□□□□ 0.72
SGCA-210ENST00000513942 FZD9O00144 591 aa19.54■□□□□ 0.72
SGCA-210ENST00000513942 RGL2O15211 777 aa19.54■□□□□ 0.72
SGCA-210ENST00000513942 NEUROD2Q15784 382 aa19.54■□□□□ 0.72
SGCA-210ENST00000513942 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
SGCA-210ENST00000513942 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
SGCA-210ENST00000513942 SNED1Q8TER0 1413 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 NBPF26B4DH59 902 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 RIPK4P57078 832 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 CALD1Q05682 793 aaKnown RBP19.53■□□□□ 0.72
SGCA-210ENST00000513942 DEFB115Q30KQ5 88 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 NBPF10Q6P3W6 841 aaKnown RBP19.53■□□□□ 0.72
SGCA-210ENST00000513942 GPC2Q8N158 579 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 SYNE4Q8N205 404 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 NBPF15Q8N660 670 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
SGCA-210ENST00000513942 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
SGCA-210ENST00000513942 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
SGCA-210ENST00000513942 SLFN5Q08AF3 891 aa19.52■□□□□ 0.72
SGCA-210ENST00000513942 ABT1Q9ULW3 272 aaKnown RBP19.52■□□□□ 0.72
SGCA-210ENST00000513942 NUP98P52948 1817 aa19.52■□□□□ 0.72
SGCA-210ENST00000513942 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.71
SGCA-210ENST00000513942 IL16Q14005 1332 aa19.51■□□□□ 0.71
SGCA-210ENST00000513942 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
SGCA-210ENST00000513942 MCM10Q7L590 875 aa19.51■□□□□ 0.71
SGCA-210ENST00000513942 JDP2Q8WYK2 163 aa19.51■□□□□ 0.71
SGCA-210ENST00000513942 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
SGCA-210ENST00000513942 COL4A5P29400 1685 aa19.51■□□□□ 0.71
SGCA-210ENST00000513942 WDR33Q9C0J8 1336 aaKnown RBP19.51■□□□□ 0.71
SGCA-210ENST00000513942 ABCC12Q96J65 1359 aa19.5■□□□□ 0.71
SGCA-210ENST00000513942 MAP2K1Q02750 393 aaPredicted RBP19.5■□□□□ 0.71
SGCA-210ENST00000513942 HLFQ16534 295 aa19.5■□□□□ 0.71
SGCA-210ENST00000513942 CDCA7LQ96GN5 454 aa19.5■□□□□ 0.71
SGCA-210ENST00000513942 PSMD1Q99460 953 aa19.5■□□□□ 0.71
SGCA-210ENST00000513942 TRMT2AQ8IZ69 625 aaKnown RBP19.49■□□□□ 0.71
SGCA-210ENST00000513942 ABHD8Q96I13 439 aa19.49■□□□□ 0.71
SGCA-210ENST00000513942 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
SGCA-210ENST00000513942 LMOD1P29536 600 aaPredicted RBP19.48■□□□□ 0.71
SGCA-210ENST00000513942 EIF6P56537 245 aaKnown RBP19.48■□□□□ 0.71
SGCA-210ENST00000513942 CRY2Q49AN0 593 aa19.48■□□□□ 0.71
SGCA-210ENST00000513942 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
SGCA-210ENST00000513942 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
SGCA-210ENST00000513942 GJA3Q9Y6H8 435 aa19.48■□□□□ 0.71
SGCA-210ENST00000513942 NEFLP07196 543 aa19.47■□□□□ 0.71
SGCA-210ENST00000513942 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
SGCA-210ENST00000513942 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
SGCA-210ENST00000513942 KDM3BQ7LBC6 1761 aa19.47■□□□□ 0.71
SGCA-210ENST00000513942 CC2D2BQ6DHV5 1058 aa19.46■□□□□ 0.71
SGCA-210ENST00000513942 NUTM1Q86Y26 1132 aa19.46■□□□□ 0.71
SGCA-210ENST00000513942 NYXQ9GZU5 481 aa19.46■□□□□ 0.71
SGCA-210ENST00000513942 RIC1Q4ADV7 1423 aa19.45■□□□□ 0.7
SGCA-210ENST00000513942 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
SGCA-210ENST00000513942 PAXIP1Q6ZW49 1069 aaPredicted RBP19.45■□□□□ 0.7
SGCA-210ENST00000513942 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
SGCA-210ENST00000513942 SCNN1DP51172 638 aa19.44■□□□□ 0.7
SGCA-210ENST00000513942 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
SGCA-210ENST00000513942 RPGRQ92834 1020 aaKnown RBP19.44■□□□□ 0.7
SGCA-210ENST00000513942 CAPNS2Q96L46 248 aa19.44■□□□□ 0.7
SGCA-210ENST00000513942 IBTKQ9P2D0 1353 aaPredicted RBP19.44■□□□□ 0.7
SGCA-210ENST00000513942 ECE1P42892 770 aa19.43■□□□□ 0.7
SGCA-210ENST00000513942 FMR1Q06787 632 aaKnown RBP eCLIP19.43■□□□□ 0.7
SGCA-210ENST00000513942 LARGE2Q8N3Y3 721 aa19.43■□□□□ 0.7
SGCA-210ENST00000513942 RCAN3Q9UKA8 241 aa19.43■□□□□ 0.7
SGCA-210ENST00000513942 EPS15P42566 896 aa19.42■□□□□ 0.7
SGCA-210ENST00000513942 GRM1Q13255 1194 aa19.42■□□□□ 0.7
SGCA-210ENST00000513942 GRIPAP1Q4V328 841 aa19.42■□□□□ 0.7
SGCA-210ENST00000513942 BEGAINQ9BUH8 593 aa19.42■□□□□ 0.7
SGCA-210ENST00000513942 SUPT16HQ9Y5B9 1047 aaKnown RBP19.42■□□□□ 0.7
SGCA-210ENST00000513942 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
SGCA-210ENST00000513942 ERVV-1B6SEH8 477 aa19.41■□□□□ 0.7
SGCA-210ENST00000513942 SLC34A2O95436 690 aa19.41■□□□□ 0.7
SGCA-210ENST00000513942 HOXA10P31260 410 aaPredicted RBP19.41■□□□□ 0.7
SGCA-210ENST00000513942 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
SGCA-210ENST00000513942 CYP4F22Q6NT55 531 aa19.41■□□□□ 0.7
SGCA-210ENST00000513942 USP50Q70EL3 339 aaPredicted RBP19.41■□□□□ 0.7
SGCA-210ENST00000513942 MIS18AQ9NYP9 233 aa19.41■□□□□ 0.7
SGCA-210ENST00000513942 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
SGCA-210ENST00000513942 PPEF1O14829 653 aaPredicted RBP19.4■□□□□ 0.7
SGCA-210ENST00000513942 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
SGCA-210ENST00000513942 GNAI1P63096 354 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 NIM1KQ8IY84 436 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 GPR101Q96P66 508 aaPredicted RBP19.4■□□□□ 0.7
SGCA-210ENST00000513942 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 UBN2Q6ZU65 1347 aa19.4■□□□□ 0.7
SGCA-210ENST00000513942 TRAF5O00463 557 aa19.39■□□□□ 0.69
SGCA-210ENST00000513942 GPTP24298 496 aa19.39■□□□□ 0.69
SGCA-210ENST00000513942 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.69
SGCA-210ENST00000513942 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
SGCA-210ENST00000513942 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms