RNA–Protein interactions for RNA: ENST00000513846.1

GAPDHP60-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 60, humanhuman

BASIC

Gene GAPDHP60, Length 995 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP60-201ENST00000513846 HOXB7P09629 217 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 TPTE2Q6XPS3 522 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 MASTLQ96GX5 879 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 FANCIQ9NVI1 1328 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
GAPDHP60-201ENST00000513846 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
GAPDHP60-201ENST00000513846 NLRP10Q86W26 655 aa12.53□□□□□ -0.4
GAPDHP60-201ENST00000513846 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
GAPDHP60-201ENST00000513846 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
GAPDHP60-201ENST00000513846 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
GAPDHP60-201ENST00000513846 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
GAPDHP60-201ENST00000513846 MYH3P11055 1940 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 NPR1P16066 1061 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 G2E3Q7L622 706 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 DBF4Q9UBU7 674 aaPredicted RBP12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
GAPDHP60-201ENST00000513846 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 CNKSR1Q969H4 720 aa12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
GAPDHP60-201ENST00000513846 ABCC4O15439 1325 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 IL16Q14005 1332 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 LMNB1P20700 586 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 JARID2Q92833 1246 aaPredicted RBP12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
GAPDHP60-201ENST00000513846 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
GAPDHP60-201ENST00000513846 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
GAPDHP60-201ENST00000513846 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
GAPDHP60-201ENST00000513846 MYD88Q99836 296 aa12.47□□□□□ -0.41
GAPDHP60-201ENST00000513846 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
GAPDHP60-201ENST00000513846 A0A1B0GUL6 1792 aa12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 POTECB2RU33 542 aa12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 HSP90AB3PQ58FF7 597 aa12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
GAPDHP60-201ENST00000513846 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 IGKV5-2P06315 115 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 MAP3K2Q9Y2U5 619 aa12.45□□□□□ -0.42
GAPDHP60-201ENST00000513846 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
GAPDHP60-201ENST00000513846 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
GAPDHP60-201ENST00000513846 VAMP4O75379 141 aa12.44□□□□□ -0.42
GAPDHP60-201ENST00000513846 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
GAPDHP60-201ENST00000513846 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
GAPDHP60-201ENST00000513846 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 ALDH1B1P30837 517 aa12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 ZNF646O15015 1829 aaPredicted RBP12.43□□□□□ -0.42
GAPDHP60-201ENST00000513846 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 SCN4AP35499 1836 aa12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 SCN9AQ15858 1988 aa12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
GAPDHP60-201ENST00000513846 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 FLIIQ13045 1269 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
GAPDHP60-201ENST00000513846 F6X3S4 739 aa12.4□□□□□ -0.42
GAPDHP60-201ENST00000513846 HTRA3P83110 453 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms