RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
CDK7-210ENST00000513629 DIAPH1O60610 1272 aaKnown RBP12.53□□□□□ -0.4
CDK7-210ENST00000513629 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
CDK7-210ENST00000513629 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
CDK7-210ENST00000513629 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
CDK7-210ENST00000513629 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
CDK7-210ENST00000513629 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
CDK7-210ENST00000513629 A0A0G2JLW4 131 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
CDK7-210ENST00000513629 COL9A1P20849 921 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 PTPREP23469 700 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 TGFB2P61812 414 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
CDK7-210ENST00000513629 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
CDK7-210ENST00000513629 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
CDK7-210ENST00000513629 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
CDK7-210ENST00000513629 DPEP1P16444 411 aa12.51□□□□□ -0.41
CDK7-210ENST00000513629 IRF6O14896 467 aa12.5□□□□□ -0.41
CDK7-210ENST00000513629 DDR1Q08345 913 aa12.5□□□□□ -0.41
CDK7-210ENST00000513629 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CDK7-210ENST00000513629 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
CDK7-210ENST00000513629 NPC1L1Q9UHC9 1359 aa12.5□□□□□ -0.41
CDK7-210ENST00000513629 VIRMAQ69YN4 1812 aaKnown RBP12.5□□□□□ -0.41
CDK7-210ENST00000513629 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
CDK7-210ENST00000513629 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
CDK7-210ENST00000513629 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
CDK7-210ENST00000513629 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
CDK7-210ENST00000513629 COL15A1P39059 1388 aa12.48□□□□□ -0.41
CDK7-210ENST00000513629 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
CDK7-210ENST00000513629 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
CDK7-210ENST00000513629 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
CDK7-210ENST00000513629 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
CDK7-210ENST00000513629 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
CDK7-210ENST00000513629 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
CDK7-210ENST00000513629 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
CDK7-210ENST00000513629 ZPR1O75312 459 aa12.47□□□□□ -0.41
CDK7-210ENST00000513629 KCNA3P22001 575 aa12.47□□□□□ -0.41
CDK7-210ENST00000513629 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
CDK7-210ENST00000513629 UBR2Q8IWV8 1755 aa12.47□□□□□ -0.41
CDK7-210ENST00000513629 TRIM66O15016 1216 aa12.46□□□□□ -0.41
CDK7-210ENST00000513629 PRSS12P56730 875 aa12.46□□□□□ -0.41
CDK7-210ENST00000513629 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
CDK7-210ENST00000513629 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
CDK7-210ENST00000513629 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
CDK7-210ENST00000513629 TM4SF1P30408 202 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 CHRNA5P30532 468 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 TTC13Q8NBP0 860 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 NARFQ9UHQ1 456 aa12.45□□□□□ -0.42
CDK7-210ENST00000513629 ARFGEF1Q9Y6D6 1849 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
CDK7-210ENST00000513629 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
CDK7-210ENST00000513629 TEFQ10587 303 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 NFIXQ14938 502 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
CDK7-210ENST00000513629 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
CDK7-210ENST00000513629 HSPA6P17066 643 aa12.43□□□□□ -0.42
CDK7-210ENST00000513629 PSEN2P49810 448 aa12.43□□□□□ -0.42
CDK7-210ENST00000513629 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
CDK7-210ENST00000513629 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
CDK7-210ENST00000513629 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
CDK7-210ENST00000513629 STARD3NLO95772 234 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
CDK7-210ENST00000513629 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 CARMIL3Q8ND23 1372 aa12.42□□□□□ -0.42
CDK7-210ENST00000513629 AFDNP55196 1824 aaKnown RBP12.41□□□□□ -0.42
CDK7-210ENST00000513629 ARHGAP33O14559 1287 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
CDK7-210ENST00000513629 SCN7AQ01118 1682 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
CDK7-210ENST00000513629 SERPINB2P05120 415 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
CDK7-210ENST00000513629 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 BICDL1Q6ZP65 573 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
CDK7-210ENST00000513629 A0A087WZG4 1122 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
CDK7-210ENST00000513629 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 PBX2P40425 430 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDK7-210ENST00000513629 PDE4DQ08499 809 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms