RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.33
CCL28-203ENST00000513525 H0YIN7 160 aa12.95□□□□□ -0.34
CCL28-203ENST00000513525 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
CCL28-203ENST00000513525 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
CCL28-203ENST00000513525 BRIP1Q9BX63 1249 aa12.95□□□□□ -0.34
CCL28-203ENST00000513525 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
CCL28-203ENST00000513525 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
CCL28-203ENST00000513525 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 PDE6BP35913 854 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
CCL28-203ENST00000513525 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 TTLL6Q8N841 843 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
CCL28-203ENST00000513525 KIF3CO14782 793 aa12.93□□□□□ -0.34
CCL28-203ENST00000513525 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
CCL28-203ENST00000513525 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
CCL28-203ENST00000513525 CNBD1Q8NA66 436 aa12.93□□□□□ -0.34
CCL28-203ENST00000513525 ZC3H4Q9UPT8 1303 aaKnown RBP12.93□□□□□ -0.34
CCL28-203ENST00000513525 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
CCL28-203ENST00000513525 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
CCL28-203ENST00000513525 ST5P78524 1137 aa12.92□□□□□ -0.34
CCL28-203ENST00000513525 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
CCL28-203ENST00000513525 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
CCL28-203ENST00000513525 RIPK4P57078 832 aa12.91□□□□□ -0.34
CCL28-203ENST00000513525 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
CCL28-203ENST00000513525 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
CCL28-203ENST00000513525 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
CCL28-203ENST00000513525 WDR90Q96KV7 1748 aa12.9□□□□□ -0.34
CCL28-203ENST00000513525 RASSF7Q02833 373 aa12.9□□□□□ -0.34
CCL28-203ENST00000513525 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
CCL28-203ENST00000513525 LAMB2P55268 1798 aa12.9□□□□□ -0.34
CCL28-203ENST00000513525 NPHP1O15259 732 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 SRGNP10124 158 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 LMNB1P20700 586 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
CCL28-203ENST00000513525 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCL28-203ENST00000513525 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
CCL28-203ENST00000513525 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
CCL28-203ENST00000513525 ERVV-1B6SEH8 477 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 NFKBIEO00221 500 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 TOMM70O94826 608 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 HSPA6P17066 643 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 PRELPP51888 382 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 HLFQ16534 295 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCL28-203ENST00000513525 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 NMRK2Q9NPI5 230 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
CCL28-203ENST00000513525 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
CCL28-203ENST00000513525 LTBP3Q9NS15 1303 aa12.87□□□□□ -0.35
CCL28-203ENST00000513525 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCL28-203ENST00000513525 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
CCL28-203ENST00000513525 SCN4AP35499 1836 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 C21orf2O43822 256 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 PYGBP11216 843 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
CCL28-203ENST00000513525 KIF6Q6ZMV9 814 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
CCL28-203ENST00000513525 MYL6BP14649 208 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 NPR1P16066 1061 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 LRP10Q7Z4F1 713 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
CCL28-203ENST00000513525 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
CCL28-203ENST00000513525 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
CCL28-203ENST00000513525 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
CCL28-203ENST00000513525 CHL1O00533 1208 aa12.83□□□□□ -0.35
CCL28-203ENST00000513525 PDIA6Q15084 440 aa12.83□□□□□ -0.35
CCL28-203ENST00000513525 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.35
CCL28-203ENST00000513525 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.35
CCL28-203ENST00000513525 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.35
CCL28-203ENST00000513525 MRS2Q9HD23 443 aa12.83□□□□□ -0.35
CCL28-203ENST00000513525 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
CCL28-203ENST00000513525 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
CCL28-203ENST00000513525 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
CCL28-203ENST00000513525 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
CCL28-203ENST00000513525 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
CCL28-203ENST00000513525 ALDH1B1P30837 517 aa12.82□□□□□ -0.36
CCL28-203ENST00000513525 FSTL1Q12841 308 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms