RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 EVI5LQ96CN4 794 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
DDR1-273ENST00000513514 ATF5Q9Y2D1 282 aaPredicted RBP9.73□□□□□ -0.85
DDR1-273ENST00000513514 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 PARP4Q9UKK3 1724 aaKnown RBP9.73□□□□□ -0.85
DDR1-273ENST00000513514 SRGAP3O43295 1099 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
DDR1-273ENST00000513514 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
DDR1-273ENST00000513514 TPM3P06753 285 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
DDR1-273ENST00000513514 PDCP20941 246 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 GLIPR1L2Q4G1C9 344 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 RNF20Q5VTR2 975 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 KSR2Q6VAB6 950 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 GAS2L3Q86XJ1 694 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 RILPL2Q969X0 211 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 PANK2Q9BZ23 570 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
DDR1-273ENST00000513514 CCDC171Q6TFL3 1326 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 RGPD3A6NKT7 1758 aaPredicted RBP9.72□□□□□ -0.85
DDR1-273ENST00000513514 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
DDR1-273ENST00000513514 ADAMTS7Q9UKP4 1686 aa9.71□□□□□ -0.85
DDR1-273ENST00000513514 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
DDR1-273ENST00000513514 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
DDR1-273ENST00000513514 ARHGEF25Q86VW2 580 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 MAP7D2Q96T17 732 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 ECHDC1Q9NTX5 307 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 MIS18AQ9NYP9 233 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 HMG20BQ9P0W2 317 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 ZDHHC9Q9Y397 364 aa9.71□□□□□ -0.86
DDR1-273ENST00000513514 OFD1O75665 1012 aa9.7□□□□□ -0.86
DDR1-273ENST00000513514 UBE2HP62256 183 aa9.7□□□□□ -0.86
DDR1-273ENST00000513514 KRT32Q14532 448 aa9.7□□□□□ -0.86
DDR1-273ENST00000513514 TTC14Q96N46 770 aa9.7□□□□□ -0.86
DDR1-273ENST00000513514 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDR1-273ENST00000513514 COL5A2P05997 1499 aaPredicted RBP9.7□□□□□ -0.86
DDR1-273ENST00000513514 RNMTO43148 476 aaKnown RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 GIGYF1O75420 1035 aaPredicted RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 LTN1O94822 1766 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 CAVIN2O95810 425 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 PROM2Q8N271 834 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 ZGPATQ8N5A5 531 aaKnown RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 RGS22Q8NE09 1264 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 SYT17Q9BSW7 474 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 LSG1Q9H089 658 aaKnown RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 DIAPH3Q9NSV4 1193 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 C9orf78Q9NZ63 289 aaPredicted RBP9.69□□□□□ -0.86
DDR1-273ENST00000513514 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
DDR1-273ENST00000513514 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 PI4KAP2A4QPH2 592 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 APBB1O00213 710 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 ZSCAN22P10073 491 aaPredicted RBP9.68□□□□□ -0.86
DDR1-273ENST00000513514 EVA1CP58658 441 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
DDR1-273ENST00000513514 PI4KAP1Q8N8J0 262 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 BCL11BQ9C0K0 894 aaPredicted RBP9.68□□□□□ -0.86
DDR1-273ENST00000513514 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
DDR1-273ENST00000513514 ADCY9O60503 1353 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 ELP1O95163 1332 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 GRM8O00222 908 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 STX6O43752 255 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 GCP02774 474 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
DDR1-273ENST00000513514 G3BP1Q13283 466 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDR1-273ENST00000513514 OS9Q13438 667 aaPredicted RBP9.67□□□□□ -0.86
DDR1-273ENST00000513514 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 ZKSCAN5Q9Y2L8 839 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 SNX14Q9Y5W7 946 aa9.67□□□□□ -0.86
DDR1-273ENST00000513514 MRC1P22897 1456 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 ZBTB7CA1YPR0 619 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 SOX12O15370 315 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 HMGB1P09429 215 aaKnown RBP9.66□□□□□ -0.86
DDR1-273ENST00000513514 NECTIN1Q15223 517 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 ATL3Q6DD88 541 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 AK9Q5TCS8 1911 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 WNK3Q9BYP7 1800 aa9.66□□□□□ -0.86
DDR1-273ENST00000513514 CPDO75976 1380 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 RPAP1Q9BWH6 1393 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms