RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ARHGEF28Q8N1W1 1705 aaKnown RBP7.13□□□□□ -1.27
HTT-211ENST00000513326 ATP10DQ9P241 1426 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 POLR3AO14802 1390 aaPredicted RBP7.13□□□□□ -1.27
HTT-211ENST00000513326 ACEP12821 1306 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 GPR37L1O60883 481 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 DXOO77932 396 aaKnown RBP7.13□□□□□ -1.27
HTT-211ENST00000513326 ADH1BP00325 375 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 MMP16P51512 607 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 TJAP1Q5JTD0 557 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 HOMEZQ8IX15 550 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 CCDC82Q8N4S0 544 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 PLSCR2Q9NRY7 297 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 PCDH10Q9P2E7 1040 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 SERPINA10Q9UK55 444 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 THRAP3Q9Y2W1 955 aaKnown RBP7.13□□□□□ -1.27
HTT-211ENST00000513326 EIF3AQ14152 1382 aaKnown RBP7.12□□□□□ -1.27
HTT-211ENST00000513326 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
HTT-211ENST00000513326 GCP02774 474 aa7.12□□□□□ -1.27
HTT-211ENST00000513326 DDB1Q16531 1140 aa7.12□□□□□ -1.27
HTT-211ENST00000513326 ABTB2Q8N961 1025 aa7.12□□□□□ -1.27
HTT-211ENST00000513326 MPHOSPH9Q99550 1183 aa7.12□□□□□ -1.27
HTT-211ENST00000513326 BCL9O00512 1426 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 TUBGCP6Q96RT7 1819 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 TLL1O43897 1013 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 CCNYL3P0C7X3 344 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
HTT-211ENST00000513326 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 NUDT12Q9BQG2 462 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 LRRC4BQ9NT99 713 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 EVA1BQ9NVM1 165 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 FKBPLQ9UIM3 349 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 NHSQ6T4R5 1651 aa7.11□□□□□ -1.27
HTT-211ENST00000513326 RGPD5Q99666 1765 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 AATKQ6ZMQ8 1374 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 CTHP32929 405 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 KCNQ4P56696 695 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 TOM1L2Q6ZVM7 507 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 ZNF526Q8TF50 670 aaPredicted RBP7.1□□□□□ -1.27
HTT-211ENST00000513326 ZNF516Q92618 1163 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 GLMNQ92990 594 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 CALR3Q96L12 384 aaKnown RBP7.1□□□□□ -1.27
HTT-211ENST00000513326 CDK19Q9BWU1 502 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 PRDM9Q9NQV7 894 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 MAP10Q9P2G4 905 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 HCSTQ9UBK5 93 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 SLIT3O75094 1523 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 BTAF1O14981 1849 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 COL24A1Q17RW2 1714 aa7.1□□□□□ -1.27
HTT-211ENST00000513326 ZC3H4Q9UPT8 1303 aaKnown RBP7.09□□□□□ -1.27
HTT-211ENST00000513326 HSPA6P17066 643 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 KCNH2Q12809 1159 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 ARMC2Q8NEN0 867 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 SLC6A16Q9GZN6 736 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 PIK3C2AO00443 1686 aa7.09□□□□□ -1.27
HTT-211ENST00000513326 ADCY9O60503 1353 aa7.08□□□□□ -1.28
HTT-211ENST00000513326 PNPLA7Q6ZV29 1317 aa7.08□□□□□ -1.28
HTT-211ENST00000513326 WDR17Q8IZU2 1322 aa7.08□□□□□ -1.28
HTT-211ENST00000513326 SOX11P35716 441 aa7.08□□□□□ -1.28
HTT-211ENST00000513326 TNS2Q63HR2 1409 aa7.08□□□□□ -1.28
HTT-211ENST00000513326 C11orf95C9JLR9 678 aaPredicted RBP7.07□□□□□ -1.28
HTT-211ENST00000513326 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
HTT-211ENST00000513326 RNF166Q96A37 237 aaPredicted RBP7.07□□□□□ -1.28
HTT-211ENST00000513326 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
HTT-211ENST00000513326 CPSF1Q10570 1443 aaKnown RBP7.07□□□□□ -1.28
HTT-211ENST00000513326 PPIP5K1Q6PFW1 1433 aa7.07□□□□□ -1.28
HTT-211ENST00000513326 TRPM1Q7Z4N2 1603 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 ZBBXA8MT70 800 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 EIF4G2P78344 907 aaKnown RBP eCLIP7.06□□□□□ -1.281e-7■■■■■ 32.2
HTT-211ENST00000513326 NR1H3Q13133 447 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 COL13A1Q5TAT6 717 aaPredicted RBP7.06□□□□□ -1.28
HTT-211ENST00000513326 MSL1Q68DK7 614 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 NLRP13Q86W25 1043 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 GPKOWQ92917 476 aaPredicted RBP eCLIP7.06□□□□□ -1.28
HTT-211ENST00000513326 ALG2Q9H553 416 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 USP6P35125 1406 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 ABCC6O95255 1503 aa7.06□□□□□ -1.28
HTT-211ENST00000513326 QSER1Q2KHR3 1735 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 PDXDC2PQ6P474 469 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 SPNS2Q8IVW8 549 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 DNAJC5GQ8N7S2 189 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 NKX2-3Q8TAU0 364 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 ADAMTS19Q8TE59 1207 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 CARD10Q9BWT7 1032 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 GPSM3Q9Y4H4 160 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 NFAT5O94916 1531 aa7.05□□□□□ -1.28
HTT-211ENST00000513326 BRD4O60885 1362 aaPredicted RBP7.05□□□□□ -1.28
HTT-211ENST00000513326 ITGBL1O95965 494 aaPredicted RBP7.04□□□□□ -1.28
HTT-211ENST00000513326 S1PR4O95977 384 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 FBXO45P0C2W1 286 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 CSB-PGBD3P0DP91 1061 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 HTRA3P83110 453 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 KCNC4Q03721 635 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 SEMA3FQ13275 785 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 ARHGEF25Q86VW2 580 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
HTT-211ENST00000513326 EXOC5O00471 708 aa7.03□□□□□ -1.28
HTT-211ENST00000513326 POLD1P28340 1107 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms