RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ERFEQ4G0M1 354 aa26.7■■□□□ 1.87
NEIL3-202ENST00000513321 LINS1Q8NG48 757 aa26.7■■□□□ 1.87
NEIL3-202ENST00000513321 CWC25Q9NXE8 425 aaPredicted RBP26.7■■□□□ 1.87
NEIL3-202ENST00000513321 IBTKQ9P2D0 1353 aaPredicted RBP26.7■■□□□ 1.86
NEIL3-202ENST00000513321 C10orf71Q711Q0 1435 aa26.7■■□□□ 1.86
NEIL3-202ENST00000513321 NRXN2Q9P2S2 1712 aa26.7■■□□□ 1.86
NEIL3-202ENST00000513321 NEURL1BA8MQ27 555 aa26.7■■□□□ 1.86
NEIL3-202ENST00000513321 IPO8O15397 1037 aaKnown RBP26.7■■□□□ 1.86
NEIL3-202ENST00000513321 BEND3Q5T5X7 828 aa26.7■■□□□ 1.86
NEIL3-202ENST00000513321 ARHGAP45Q92619 1136 aa26.7■■□□□ 1.86
NEIL3-202ENST00000513321 API5Q9BZZ5 524 aaKnown RBP26.7■■□□□ 1.86
NEIL3-202ENST00000513321 ANKRD36CQ5JPF3 1778 aa26.69■■□□□ 1.86
NEIL3-202ENST00000513321 BRIP1Q9BX63 1249 aa26.69■■□□□ 1.86
NEIL3-202ENST00000513321 SYNE4Q8N205 404 aa26.68■■□□□ 1.86
NEIL3-202ENST00000513321 NLGN2Q8NFZ4 835 aa26.67■■□□□ 1.86
NEIL3-202ENST00000513321 FAM89AQ96GI7 184 aa26.67■■□□□ 1.86
NEIL3-202ENST00000513321 TGFB2P61812 414 aa26.66■■□□□ 1.86
NEIL3-202ENST00000513321 RTL5Q5HYW3 569 aaPredicted RBP26.66■■□□□ 1.86
NEIL3-202ENST00000513321 RNF123Q5XPI4 1314 aa26.66■■□□□ 1.86
NEIL3-202ENST00000513321 SH3TC1Q8TE82 1336 aa26.66■■□□□ 1.86
NEIL3-202ENST00000513321 GCKRQ14397 625 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 ATF7IPQ6VMQ6 1270 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 ZBTB38Q8NAP3 1195 aaPredicted RBP26.65■■□□□ 1.86
NEIL3-202ENST00000513321 SRCIN1Q9C0H9 1055 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 PDE6BP35913 854 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 SLC10A5Q5PT55 438 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 ZKSCAN2Q63HK3 967 aa26.65■■□□□ 1.86
NEIL3-202ENST00000513321 JARID2Q92833 1246 aaPredicted RBP26.65■■□□□ 1.86
NEIL3-202ENST00000513321 ABCC12Q96J65 1359 aa26.64■■□□□ 1.85
NEIL3-202ENST00000513321 A0A0G2JLW4 131 aa26.64■■□□□ 1.85
NEIL3-202ENST00000513321 PCCAP05165 728 aaPredicted RBP26.64■■□□□ 1.85
NEIL3-202ENST00000513321 ALDH1L1O75891 902 aa26.63■■□□□ 1.85
NEIL3-202ENST00000513321 TRIM27P14373 513 aa26.63■■□□□ 1.85
NEIL3-202ENST00000513321 HCLS1P14317 486 aaPredicted RBP26.62■■□□□ 1.85
NEIL3-202ENST00000513321 DPEP1P16444 411 aa26.62■■□□□ 1.85
NEIL3-202ENST00000513321 CHRNA5P30532 468 aa26.62■■□□□ 1.85
NEIL3-202ENST00000513321 TNNQ9UQP3 1299 aa26.62■■□□□ 1.85
NEIL3-202ENST00000513321 C2CD5Q86YS7 1000 aa26.61■■□□□ 1.85
NEIL3-202ENST00000513321 H0YIN7 160 aa26.6■■□□□ 1.85
NEIL3-202ENST00000513321 H7C1W4 665 aa26.6■■□□□ 1.85
NEIL3-202ENST00000513321 CLUAP1Q96AJ1 413 aa26.6■■□□□ 1.85
NEIL3-202ENST00000513321 KIF13BQ9NQT8 1826 aa26.6■■□□□ 1.85
NEIL3-202ENST00000513321 KLRG2A4D1S0 409 aaPredicted RBP26.6■■□□□ 1.85
NEIL3-202ENST00000513321 IRS4O14654 1257 aaPredicted RBP26.6■■□□□ 1.85
NEIL3-202ENST00000513321 CCT4P50991 539 aaKnown RBP26.6■■□□□ 1.85
NEIL3-202ENST00000513321 PXDNLA1KZ92 1463 aa26.59■■□□□ 1.85
NEIL3-202ENST00000513321 KCNA3P22001 575 aa26.59■■□□□ 1.85
NEIL3-202ENST00000513321 UBE3BQ7Z3V4 1068 aa26.59■■□□□ 1.85
NEIL3-202ENST00000513321 NLRP3Q96P20 1036 aa26.59■■□□□ 1.85
NEIL3-202ENST00000513321 PDZRN3Q9UPQ7 1066 aa26.59■■□□□ 1.85
NEIL3-202ENST00000513321 C3orf67Q6ZVT6 689 aa26.58■■□□□ 1.85
NEIL3-202ENST00000513321 C9orf78Q9NZ63 289 aaPredicted RBP26.58■■□□□ 1.85
NEIL3-202ENST00000513321 ABCC4O15439 1325 aa26.57■■□□□ 1.84
NEIL3-202ENST00000513321 ANKRD31Q8N7Z5 1873 aa26.57■■□□□ 1.84
NEIL3-202ENST00000513321 RIC1Q4ADV7 1423 aa26.56■■□□□ 1.84
NEIL3-202ENST00000513321 GRM8O00222 908 aa26.56■■□□□ 1.84
NEIL3-202ENST00000513321 SRGNP10124 158 aa26.56■■□□□ 1.84
NEIL3-202ENST00000513321 INTS3Q68E01 1043 aaKnown RBP26.56■■□□□ 1.84
NEIL3-202ENST00000513321 CDHR2Q9BYE9 1310 aa26.56■■□□□ 1.84
NEIL3-202ENST00000513321 PLIN1O60240 522 aa26.55■■□□□ 1.84
NEIL3-202ENST00000513321 HSP90B1P14625 803 aaKnown RBP26.55■■□□□ 1.84
NEIL3-202ENST00000513321 CASP7P55210 303 aa26.55■■□□□ 1.84
NEIL3-202ENST00000513321 CRY2Q49AN0 593 aa26.55■■□□□ 1.84
NEIL3-202ENST00000513321 DZIP1LQ8IYY4 767 aaKnown RBP26.55■■□□□ 1.84
NEIL3-202ENST00000513321 ZNF622Q969S3 477 aaKnown RBP eCLIP26.55■■□□□ 1.84
NEIL3-202ENST00000513321 WWC3Q9ULE0 1092 aa26.55■■□□□ 1.84
NEIL3-202ENST00000513321 FTSJ3Q8IY81 847 aaKnown RBP26.54■■□□□ 1.84
NEIL3-202ENST00000513321 MASTLQ96GX5 879 aa26.54■■□□□ 1.84
NEIL3-202ENST00000513321 PIM2Q9P1W9 311 aa26.54■■□□□ 1.84
NEIL3-202ENST00000513321 PDE8AO60658 829 aa26.53■■□□□ 1.84
NEIL3-202ENST00000513321 NPR1P16066 1061 aa26.53■■□□□ 1.84
NEIL3-202ENST00000513321 USP44Q9H0E7 712 aa26.53■■□□□ 1.84
NEIL3-202ENST00000513321 N4BP2Q86UW6 1770 aaPredicted RBP26.52■■□□□ 1.84
NEIL3-202ENST00000513321 NBPF7P0C2Y1 421 aaPredicted RBP26.52■■□□□ 1.84
NEIL3-202ENST00000513321 STYK1Q6J9G0 422 aa26.52■■□□□ 1.84
NEIL3-202ENST00000513321 TMEM57Q8N5G2 664 aa26.52■■□□□ 1.84
NEIL3-202ENST00000513321 KIAA1551Q9HCM1 1747 aa26.52■■□□□ 1.84
NEIL3-202ENST00000513321 TNRC6CQ9HCJ0 1690 aaKnown RBP26.51■■□□□ 1.83
NEIL3-202ENST00000513321 RLBP1P12271 317 aa26.51■■□□□ 1.83
NEIL3-202ENST00000513321 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.51■■□□□ 1.83
NEIL3-202ENST00000513321 RPGRQ92834 1020 aaKnown RBP26.51■■□□□ 1.83
NEIL3-202ENST00000513321 UTYO14607 1347 aa26.51■■□□□ 1.83
NEIL3-202ENST00000513321 SF3B3Q15393 1217 aaKnown RBP26.5■■□□□ 1.83
NEIL3-202ENST00000513321 MS4A1P11836 297 aa26.49■■□□□ 1.83
NEIL3-202ENST00000513321 HOXA10P31260 410 aaPredicted RBP26.49■■□□□ 1.83
NEIL3-202ENST00000513321 TTLL6Q8N841 843 aa26.49■■□□□ 1.83
NEIL3-202ENST00000513321 PANK1Q8TE04 598 aa26.49■■□□□ 1.83
NEIL3-202ENST00000513321 PLA2G12BQ9BX93 195 aa26.49■■□□□ 1.83
NEIL3-202ENST00000513321 DALRD3Q5D0E6 543 aaKnown RBP26.49■■□□□ 1.83
NEIL3-202ENST00000513321 PELP1Q8IZL8 1130 aaKnown RBP26.49■■□□□ 1.83
NEIL3-202ENST00000513321 CNKSR1Q969H4 720 aa26.49■■□□□ 1.83
NEIL3-202ENST00000513321 RBM17Q96I25 401 aaKnown RBP26.49■■□□□ 1.83
NEIL3-202ENST00000513321 BCS1LQ9Y276 419 aa26.48■■□□□ 1.83
NEIL3-202ENST00000513321 DDX60Q8IY21 1712 aaKnown RBP26.47■■□□□ 1.83
NEIL3-202ENST00000513321 ALDH1B1P30837 517 aa26.47■■□□□ 1.83
NEIL3-202ENST00000513321 CTSWP56202 376 aa26.47■■□□□ 1.83
NEIL3-202ENST00000513321 TTLL11Q8NHH1 800 aa26.46■■□□□ 1.83
NEIL3-202ENST00000513321 SUCLG2Q96I99 432 aa26.46■■□□□ 1.83
NEIL3-202ENST00000513321 CCDC85AQ96PX6 553 aaPredicted RBP26.46■■□□□ 1.83
NEIL3-202ENST00000513321 CRAMP1Q96RY5 1269 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms