RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
PTPN20-227ENST00000513159 TRIM27P14373 513 aa13.18□□□□□ -0.3
PTPN20-227ENST00000513159 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
PTPN20-227ENST00000513159 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
PTPN20-227ENST00000513159 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-227ENST00000513159 CACNA1SQ13698 1873 aa13.18□□□□□ -0.3
PTPN20-227ENST00000513159 KIF16BQ96L93 1317 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 RLBP1P12271 317 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 CASP7P55210 303 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 ERFEQ4G0M1 354 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-227ENST00000513159 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-227ENST00000513159 COL4A1P02462 1669 aa13.17□□□□□ -0.3
PTPN20-227ENST00000513159 ABCC4O15439 1325 aa13.16□□□□□ -0.3
PTPN20-227ENST00000513159 PLIN1O60240 522 aa13.16□□□□□ -0.3
PTPN20-227ENST00000513159 GCKRQ14397 625 aa13.16□□□□□ -0.3
PTPN20-227ENST00000513159 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
PTPN20-227ENST00000513159 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
PTPN20-227ENST00000513159 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-227ENST00000513159 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
PTPN20-227ENST00000513159 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-227ENST00000513159 KCNA3P22001 575 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-227ENST00000513159 SLC10A5Q5PT55 438 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
PTPN20-227ENST00000513159 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-227ENST00000513159 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 H7C1W4 665 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-227ENST00000513159 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
PTPN20-227ENST00000513159 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
PTPN20-227ENST00000513159 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
PTPN20-227ENST00000513159 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-227ENST00000513159 CHRNA5P30532 468 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
PTPN20-227ENST00000513159 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-227ENST00000513159 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 USP44Q9H0E7 712 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
PTPN20-227ENST00000513159 A0A0G2JLW4 131 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-227ENST00000513159 DPEP1P16444 411 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 UTYO14607 1347 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
PTPN20-227ENST00000513159 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
PTPN20-227ENST00000513159 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
PTPN20-227ENST00000513159 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
PTPN20-227ENST00000513159 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
PTPN20-227ENST00000513159 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
PTPN20-227ENST00000513159 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
PTPN20-227ENST00000513159 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-227ENST00000513159 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
PTPN20-227ENST00000513159 GRM8O00222 908 aa13.1□□□□□ -0.31
PTPN20-227ENST00000513159 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-227ENST00000513159 ST5P78524 1137 aa13.1□□□□□ -0.31
PTPN20-227ENST00000513159 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
PTPN20-227ENST00000513159 SPEF2Q9C093 1822 aa13.1□□□□□ -0.31
PTPN20-227ENST00000513159 SRGNP10124 158 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-227ENST00000513159 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
PTPN20-227ENST00000513159 TGFB2P61812 414 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 FOXO4P98177 505 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 C2CD5Q86YS7 1000 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
PTPN20-227ENST00000513159 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 MEIS3Q99687 375 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
PTPN20-227ENST00000513159 PDE6BP35913 854 aa13.08□□□□□ -0.32
PTPN20-227ENST00000513159 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
PTPN20-227ENST00000513159 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
PTPN20-227ENST00000513159 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.32
PTPN20-227ENST00000513159 PDE8AO60658 829 aa13.07□□□□□ -0.32
PTPN20-227ENST00000513159 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-227ENST00000513159 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
PTPN20-227ENST00000513159 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
PTPN20-227ENST00000513159 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
PTPN20-227ENST00000513159 UTRNP46939 3433 aa13.06□□□□□ -0.32
PTPN20-227ENST00000513159 H0YIN7 160 aa13.06□□□□□ -0.32
PTPN20-227ENST00000513159 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-227ENST00000513159 NPHP1O15259 732 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms