RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RARSP54136 660 aaKnown RBP22.19■■□□□ 1.14
DDR1-270ENST00000513043 RTL5Q5HYW3 569 aaPredicted RBP22.19■■□□□ 1.14
DDR1-270ENST00000513043 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
DDR1-270ENST00000513043 DNAAF4Q8WXU2 420 aa22.19■■□□□ 1.14
DDR1-270ENST00000513043 BRIP1Q9BX63 1249 aa22.19■■□□□ 1.14
DDR1-270ENST00000513043 ANKRD31Q8N7Z5 1873 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 KIAA1551Q9HCM1 1747 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 IBTKQ9P2D0 1353 aaPredicted RBP22.18■■□□□ 1.14
DDR1-270ENST00000513043 DCAF8L1A6NGE4 600 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 C2CD5Q86YS7 1000 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 UTRNP46939 3433 aa22.18■■□□□ 1.14
DDR1-270ENST00000513043 IGKV5-2P06315 115 aa22.17■■□□□ 1.14
DDR1-270ENST00000513043 PDE6BP35913 854 aa22.17■■□□□ 1.14
DDR1-270ENST00000513043 CWF19L2Q2TBE0 894 aaKnown RBP22.17■■□□□ 1.14
DDR1-270ENST00000513043 KCNA3P22001 575 aa22.16■■□□□ 1.14
DDR1-270ENST00000513043 TRIM28Q13263 835 aaKnown RBP22.16■■□□□ 1.14
DDR1-270ENST00000513043 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
DDR1-270ENST00000513043 JARID2Q92833 1246 aaPredicted RBP22.16■■□□□ 1.14
DDR1-270ENST00000513043 H0YIN7 160 aa22.15■■□□□ 1.14
DDR1-270ENST00000513043 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
DDR1-270ENST00000513043 GPR162Q16538 588 aa22.15■■□□□ 1.14
DDR1-270ENST00000513043 FAM89AQ96GI7 184 aa22.15■■□□□ 1.14
DDR1-270ENST00000513043 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
DDR1-270ENST00000513043 SH3TC1Q8TE82 1336 aa22.14■■□□□ 1.14
DDR1-270ENST00000513043 BCAR3O75815 825 aa22.14■■□□□ 1.13
DDR1-270ENST00000513043 CCDC191Q8NCU4 936 aa22.14■■□□□ 1.13
DDR1-270ENST00000513043 NOB1Q9ULX3 412 aaKnown RBP22.14■■□□□ 1.13
DDR1-270ENST00000513043 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.13
DDR1-270ENST00000513043 PTPRCP08575 1304 aa22.13■■□□□ 1.13
DDR1-270ENST00000513043 NEURL1BA8MQ27 555 aa22.13■■□□□ 1.13
DDR1-270ENST00000513043 YY1P25490 414 aa22.13■■□□□ 1.13
DDR1-270ENST00000513043 C3orf67Q6ZVT6 689 aa22.13■■□□□ 1.13
DDR1-270ENST00000513043 ZNF622Q969S3 477 aaKnown RBP eCLIP22.13■■□□□ 1.13
DDR1-270ENST00000513043 GOLGB1Q14789 3259 aaKnown RBP22.12■■□□□ 1.13
DDR1-270ENST00000513043 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
DDR1-270ENST00000513043 LINS1Q8NG48 757 aa22.12■■□□□ 1.13
DDR1-270ENST00000513043 PIM2Q9P1W9 311 aa22.12■■□□□ 1.13
DDR1-270ENST00000513043 BCS1LQ9Y276 419 aa22.12■■□□□ 1.13
DDR1-270ENST00000513043 COL11A2P13942 1736 aaPredicted RBP22.11■■□□□ 1.13
DDR1-270ENST00000513043 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
DDR1-270ENST00000513043 BEND3Q5T5X7 828 aa22.11■■□□□ 1.13
DDR1-270ENST00000513043 ZBTB38Q8NAP3 1195 aaPredicted RBP22.11■■□□□ 1.13
DDR1-270ENST00000513043 SRGNP10124 158 aa22.1■■□□□ 1.13
DDR1-270ENST00000513043 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
DDR1-270ENST00000513043 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
DDR1-270ENST00000513043 KLRG2A4D1S0 409 aaPredicted RBP22.09■■□□□ 1.13
DDR1-270ENST00000513043 IRS4O14654 1257 aaPredicted RBP22.09■■□□□ 1.13
DDR1-270ENST00000513043 PCCAP05165 728 aaPredicted RBP22.09■■□□□ 1.13
DDR1-270ENST00000513043 BRPF1P55201 1214 aaPredicted RBP22.09■■□□□ 1.13
DDR1-270ENST00000513043 GCKRQ14397 625 aa22.09■■□□□ 1.13
DDR1-270ENST00000513043 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
DDR1-270ENST00000513043 NLRP3Q96P20 1036 aa22.09■■□□□ 1.13
DDR1-270ENST00000513043 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
DDR1-270ENST00000513043 KIF16BQ96L93 1317 aa22.08■■□□□ 1.13
DDR1-270ENST00000513043 RIC1Q4ADV7 1423 aa22.08■■□□□ 1.13
DDR1-270ENST00000513043 MASTLQ96GX5 879 aa22.08■■□□□ 1.13
DDR1-270ENST00000513043 NPR1P16066 1061 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 STYK1Q6J9G0 422 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 TTLL6Q8N841 843 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
DDR1-270ENST00000513043 SRCIN1Q9C0H9 1055 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
DDR1-270ENST00000513043 DLEC1Q9Y238 1755 aa22.07■■□□□ 1.12
DDR1-270ENST00000513043 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
DDR1-270ENST00000513043 BRCA1P38398 1863 aaKnown RBP22.06■■□□□ 1.12
DDR1-270ENST00000513043 API5Q9BZZ5 524 aaKnown RBP22.05■■□□□ 1.12
DDR1-270ENST00000513043 TNNQ9UQP3 1299 aa22.05■■□□□ 1.12
DDR1-270ENST00000513043 DDX60Q8IY21 1712 aaKnown RBP22.05■■□□□ 1.12
DDR1-270ENST00000513043 H7C1W4 665 aa22.04■■□□□ 1.12
DDR1-270ENST00000513043 ALDH1L1O75891 902 aa22.04■■□□□ 1.12
DDR1-270ENST00000513043 CNKSR1Q969H4 720 aa22.04■■□□□ 1.12
DDR1-270ENST00000513043 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
DDR1-270ENST00000513043 PRPF40BQ6NWY9 871 aaKnown RBP22.03■■□□□ 1.12
DDR1-270ENST00000513043 CDHR2Q9BYE9 1310 aa22.03■■□□□ 1.12
DDR1-270ENST00000513043 LAMB2P55268 1798 aa22.02■■□□□ 1.12
DDR1-270ENST00000513043 TRIM27P14373 513 aa22.02■■□□□ 1.12
DDR1-270ENST00000513043 ARHGAP45Q92619 1136 aa22.02■■□□□ 1.12
DDR1-270ENST00000513043 CLUAP1Q96AJ1 413 aa22.02■■□□□ 1.12
DDR1-270ENST00000513043 RBM17Q96I25 401 aaKnown RBP22.02■■□□□ 1.12
DDR1-270ENST00000513043 CCDC85AQ96PX6 553 aaPredicted RBP22.02■■□□□ 1.12
DDR1-270ENST00000513043 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.12
DDR1-270ENST00000513043 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
DDR1-270ENST00000513043 CACNA1SQ13698 1873 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 GRM8O00222 908 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 GRIN3BO60391 1043 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 PDE8AO60658 829 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 ZKSCAN2Q63HK3 967 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 ATF7IPQ6VMQ6 1270 aa22.01■■□□□ 1.11
DDR1-270ENST00000513043 C21orf2O43822 256 aa22■■□□□ 1.11
DDR1-270ENST00000513043 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
DDR1-270ENST00000513043 ALDH1B1P30837 517 aa22■■□□□ 1.11
DDR1-270ENST00000513043 HOXA10P31260 410 aaPredicted RBP22■■□□□ 1.11
DDR1-270ENST00000513043 CASP7P55210 303 aa22■■□□□ 1.11
DDR1-270ENST00000513043 SLX4Q8IY92 1834 aa22■■□□□ 1.11
DDR1-270ENST00000513043 SF3B3Q15393 1217 aaKnown RBP21.99■■□□□ 1.11
DDR1-270ENST00000513043 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
DDR1-270ENST00000513043 DDX46Q7L014 1031 aaKnown RBP21.99■■□□□ 1.11
DDR1-270ENST00000513043 ABCC4O15439 1325 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms