RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 ARHGAP9Q9BRR9 750 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 CDK19Q9BWU1 502 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
RFC1-215ENST00000512881 FMN2Q9NZ56 1722 aa9.9□□□□□ -0.82
RFC1-215ENST00000512881 GPRASP1Q5JY77 1395 aa9.9□□□□□ -0.82
RFC1-215ENST00000512881 MRPL14Q6P1L8 145 aaKnown RBP9.9□□□□□ -0.82
RFC1-215ENST00000512881 VASH1Q7L8A9 365 aaPredicted RBP9.9□□□□□ -0.82
RFC1-215ENST00000512881 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
RFC1-215ENST00000512881 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
RFC1-215ENST00000512881 VPS72Q15906 364 aa9.89□□□□□ -0.83
RFC1-215ENST00000512881 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
RFC1-215ENST00000512881 SLIT2O94813 1529 aa9.88□□□□□ -0.83
RFC1-215ENST00000512881 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
RFC1-215ENST00000512881 SIN3AQ96ST3 1273 aa9.88□□□□□ -0.83
RFC1-215ENST00000512881 TRIM34Q9BYJ4 488 aa9.88□□□□□ -0.83
RFC1-215ENST00000512881 SRCAPQ6ZRS2 3230 aa9.88□□□□□ -0.83
RFC1-215ENST00000512881 KIF1AQ12756 1690 aa9.87□□□□□ -0.83
RFC1-215ENST00000512881 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
RFC1-215ENST00000512881 NBPF8Q3BBV2 869 aa9.87□□□□□ -0.83
RFC1-215ENST00000512881 SLC10A4Q96EP9 437 aa9.87□□□□□ -0.83
RFC1-215ENST00000512881 PURBQ96QR8 312 aaKnown RBP9.87□□□□□ -0.83
RFC1-215ENST00000512881 CCDC9Q9Y3X0 531 aaKnown RBP9.87□□□□□ -0.83
RFC1-215ENST00000512881 RALGAPBQ86X10 1494 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 WFS1O76024 890 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 CCDC125Q86Z20 511 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 SEPT12Q8IYM1 358 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 CCDC116Q8IYX3 515 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 MEIOBQ8N635 442 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 BTG4Q9NY30 223 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 EP400Q96L91 3159 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 TULP4Q9NRJ4 1543 aa9.86□□□□□ -0.83
RFC1-215ENST00000512881 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
RFC1-215ENST00000512881 ACEP12821 1306 aa9.84□□□□□ -0.83
RFC1-215ENST00000512881 CENPJQ9HC77 1338 aaPredicted RBP9.84□□□□□ -0.83
RFC1-215ENST00000512881 TERTO14746 1132 aaKnown RBP9.84□□□□□ -0.83
RFC1-215ENST00000512881 SRPK2P78362 688 aaKnown RBP9.84□□□□□ -0.83
RFC1-215ENST00000512881 PTK2Q05397 1052 aa9.84□□□□□ -0.83
RFC1-215ENST00000512881 TMEM259Q4ZIN3 620 aa9.84□□□□□ -0.83
RFC1-215ENST00000512881 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
RFC1-215ENST00000512881 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
RFC1-215ENST00000512881 SCARF1Q14162 830 aa9.83□□□□□ -0.84
RFC1-215ENST00000512881 ZBTB33Q86T24 672 aa9.83□□□□□ -0.84
RFC1-215ENST00000512881 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
RFC1-215ENST00000512881 KCTD15Q96SI1 283 aaPredicted RBP9.83□□□□□ -0.84
RFC1-215ENST00000512881 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
RFC1-215ENST00000512881 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
RFC1-215ENST00000512881 ATP7BP35670 1465 aa9.83□□□□□ -0.84
RFC1-215ENST00000512881 KRT27Q7Z3Y8 459 aa9.82□□□□□ -0.84
RFC1-215ENST00000512881 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
RFC1-215ENST00000512881 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
RFC1-215ENST00000512881 CABP1Q9NZU7 370 aa9.82□□□□□ -0.84
RFC1-215ENST00000512881 EMILIN1Q9Y6C2 1016 aa9.82□□□□□ -0.84
RFC1-215ENST00000512881 POLR3AO14802 1390 aaPredicted RBP9.82□□□□□ -0.84
RFC1-215ENST00000512881 RGPD8O14715 1765 aaPredicted RBP9.82□□□□□ -0.84
RFC1-215ENST00000512881 ZC3H6P61129 1189 aaKnown RBP9.81□□□□□ -0.84
RFC1-215ENST00000512881 CHRNA2Q15822 529 aa9.81□□□□□ -0.84
RFC1-215ENST00000512881 INTS6LQ5JSJ4 861 aaKnown RBP9.81□□□□□ -0.84
RFC1-215ENST00000512881 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
RFC1-215ENST00000512881 GLI3P10071 1580 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 SOBPA7XYQ1 873 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
RFC1-215ENST00000512881 SPATA31A5Q5VU36 1347 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 SPATA31A7Q8IWB4 1347 aa9.8□□□□□ -0.84
RFC1-215ENST00000512881 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
RFC1-215ENST00000512881 NLRP13Q86W25 1043 aa9.79□□□□□ -0.84
RFC1-215ENST00000512881 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
RFC1-215ENST00000512881 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
RFC1-215ENST00000512881 EVC2Q86UK5 1308 aa9.79□□□□□ -0.84
RFC1-215ENST00000512881 ROCK2O75116 1388 aaKnown RBP9.78□□□□□ -0.84
RFC1-215ENST00000512881 GPR37L1O60883 481 aa9.78□□□□□ -0.84
RFC1-215ENST00000512881 GCP02774 474 aa9.78□□□□□ -0.84
RFC1-215ENST00000512881 EVA1CP58658 441 aa9.78□□□□□ -0.84
RFC1-215ENST00000512881 DEFB132Q7Z7B7 95 aa9.78□□□□□ -0.84
RFC1-215ENST00000512881 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
RFC1-215ENST00000512881 ARHGEF28Q8N1W1 1705 aaKnown RBP9.78□□□□□ -0.84
RFC1-215ENST00000512881 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
RFC1-215ENST00000512881 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
RFC1-215ENST00000512881 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 WIPF1O43516 503 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 CBLBQ13191 982 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 Q6ZVU0 165 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 USP19O94966 1318 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.85
RFC1-215ENST00000512881 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
RFC1-215ENST00000512881 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.76□□□□□ -0.85
RFC1-215ENST00000512881 BMP2P12643 396 aa9.76□□□□□ -0.85
RFC1-215ENST00000512881 FAM182BQ5T319 152 aa9.76□□□□□ -0.85
RFC1-215ENST00000512881 NPAS3Q8IXF0 933 aa9.76□□□□□ -0.85
RFC1-215ENST00000512881 MTMR14Q8NCE2 650 aa9.76□□□□□ -0.85
RFC1-215ENST00000512881 ALS2Q96Q42 1657 aa9.76□□□□□ -0.85
RFC1-215ENST00000512881 H3BM21 787 aa9.75□□□□□ -0.85
RFC1-215ENST00000512881 UPP2O95045 317 aa9.75□□□□□ -0.85
RFC1-215ENST00000512881 VEGFBP49765 207 aa9.75□□□□□ -0.85
RFC1-215ENST00000512881 DHX9Q08211 1270 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms