RNA–Protein interactions for RNA: ENST00000512553.5

ITGA3-213, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-213ENST00000512553 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
ITGA3-213ENST00000512553 RRAGCQ9HB90 399 aa12.21□□□□□ -0.45
ITGA3-213ENST00000512553 IFT57Q9NWB7 429 aa12.21□□□□□ -0.45
ITGA3-213ENST00000512553 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
ITGA3-213ENST00000512553 NTSR2O95665 410 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
ITGA3-213ENST00000512553 PDIA6Q15084 440 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 C7orf43Q8WVR3 580 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 HYPKQ9NX55 129 aa12.2□□□□□ -0.46
ITGA3-213ENST00000512553 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 IQCA1LA6NCM1 817 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 PSMD1Q99460 953 aa12.19□□□□□ -0.46
ITGA3-213ENST00000512553 APAF1O14727 1248 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
ITGA3-213ENST00000512553 PRELPP51888 382 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 PLBD2Q8NHP8 589 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
ITGA3-213ENST00000512553 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
ITGA3-213ENST00000512553 ANP32CO43423 234 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
ITGA3-213ENST00000512553 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 PROSER3Q2NL68 480 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
ITGA3-213ENST00000512553 DUSP27Q5VZP5 1158 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 TMC4Q7Z404 712 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
ITGA3-213ENST00000512553 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
ITGA3-213ENST00000512553 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
ITGA3-213ENST00000512553 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
ITGA3-213ENST00000512553 VPS33BQ9H267 617 aa12.16□□□□□ -0.46
ITGA3-213ENST00000512553 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
ITGA3-213ENST00000512553 LRRC37AA6NMS7 1700 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
ITGA3-213ENST00000512553 ANXA1P04083 346 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
ITGA3-213ENST00000512553 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
ITGA3-213ENST00000512553 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
ITGA3-213ENST00000512553 EIF6P56537 245 aaKnown RBP12.14□□□□□ -0.47
ITGA3-213ENST00000512553 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
ITGA3-213ENST00000512553 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
ITGA3-213ENST00000512553 DDX46Q7L014 1031 aaKnown RBP12.14□□□□□ -0.47
ITGA3-213ENST00000512553 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
ITGA3-213ENST00000512553 IL16Q14005 1332 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 MYH3P11055 1940 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 BBOX1O75936 387 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 GPC2Q8N158 579 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 MRS2Q9HD23 443 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
ITGA3-213ENST00000512553 ABCC4O15439 1325 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 FZD9O00144 591 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 DDNO94850 711 aaPredicted RBP12.12□□□□□ -0.47
ITGA3-213ENST00000512553 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
ITGA3-213ENST00000512553 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 LDHDQ86WU2 507 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 ISCA1Q9BUE6 129 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
ITGA3-213ENST00000512553 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
ITGA3-213ENST00000512553 GRAPQ13588 217 aa12.11□□□□□ -0.47
ITGA3-213ENST00000512553 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
ITGA3-213ENST00000512553 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
ITGA3-213ENST00000512553 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
ITGA3-213ENST00000512553 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
ITGA3-213ENST00000512553 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
ITGA3-213ENST00000512553 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
ITGA3-213ENST00000512553 POTECB2RU33 542 aa12.1□□□□□ -0.47
ITGA3-213ENST00000512553 HCLS1P14317 486 aaPredicted RBP12.1□□□□□ -0.47
ITGA3-213ENST00000512553 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
ITGA3-213ENST00000512553 DPP8Q6V1X1 898 aaPredicted RBP12.1□□□□□ -0.47
ITGA3-213ENST00000512553 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
ITGA3-213ENST00000512553 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
ITGA3-213ENST00000512553 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
ITGA3-213ENST00000512553 TAF1P21675 1872 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 PPIP5K2O43314 1243 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 C3orf67Q6ZVT6 689 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 MPNDQ8N594 471 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
ITGA3-213ENST00000512553 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
ITGA3-213ENST00000512553 EPHX2P34913 555 aa12.08□□□□□ -0.48
ITGA3-213ENST00000512553 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms