RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
DDX41-215ENST00000512431 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
DDX41-215ENST00000512431 TRAF5O00463 557 aa16.82■□□□□ 0.28
DDX41-215ENST00000512431 NIM1KQ8IY84 436 aa16.82■□□□□ 0.28
DDX41-215ENST00000512431 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
DDX41-215ENST00000512431 AOC2O75106 756 aa16.81■□□□□ 0.28
DDX41-215ENST00000512431 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
DDX41-215ENST00000512431 MCOLN1Q9GZU1 580 aa16.81■□□□□ 0.28
DDX41-215ENST00000512431 ADARB2Q9NS39 739 aaKnown RBP16.81■□□□□ 0.28
DDX41-215ENST00000512431 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
DDX41-215ENST00000512431 HLFQ16534 295 aa16.8■□□□□ 0.28
DDX41-215ENST00000512431 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
DDX41-215ENST00000512431 NBPF26B4DH59 902 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 BRPF1P55201 1214 aaPredicted RBP16.79■□□□□ 0.28
DDX41-215ENST00000512431 DGKZQ13574 1117 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
DDX41-215ENST00000512431 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
DDX41-215ENST00000512431 SAPCD2Q86UD0 394 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 NUTM1Q86Y26 1132 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 NBPF15Q8N660 670 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
DDX41-215ENST00000512431 HHIPL1Q96JK4 782 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
DDX41-215ENST00000512431 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
DDX41-215ENST00000512431 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
DDX41-215ENST00000512431 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 HOXA10P31260 410 aaPredicted RBP16.78■□□□□ 0.28
DDX41-215ENST00000512431 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
DDX41-215ENST00000512431 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.28
DDX41-215ENST00000512431 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
DDX41-215ENST00000512431 MCM10Q7L590 875 aa16.77■□□□□ 0.28
DDX41-215ENST00000512431 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
DDX41-215ENST00000512431 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 CRAMP1Q96RY5 1269 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 ZNF408Q9H9D4 720 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 ABCC12Q96J65 1359 aa16.76■□□□□ 0.27
DDX41-215ENST00000512431 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
DDX41-215ENST00000512431 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
DDX41-215ENST00000512431 RSPH6AQ9H0K4 717 aa16.75■□□□□ 0.27
DDX41-215ENST00000512431 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
DDX41-215ENST00000512431 TRPM7Q96QT4 1865 aa16.75■□□□□ 0.27
DDX41-215ENST00000512431 COL4A5P29400 1685 aa16.75■□□□□ 0.27
DDX41-215ENST00000512431 AOC3Q16853 763 aa16.74■□□□□ 0.27
DDX41-215ENST00000512431 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
DDX41-215ENST00000512431 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
DDX41-215ENST00000512431 GLIS2Q9BZE0 524 aaPredicted RBP16.74■□□□□ 0.27
DDX41-215ENST00000512431 MAP3K15Q6ZN16 1313 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 HTATSF1O43719 755 aaKnown RBP16.73■□□□□ 0.27
DDX41-215ENST00000512431 GPTP24298 496 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 CXCL9Q07325 125 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 NOGQ13253 232 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
DDX41-215ENST00000512431 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 ZC3H15Q8WU90 426 aaKnown RBP16.73■□□□□ 0.27
DDX41-215ENST00000512431 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
DDX41-215ENST00000512431 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
DDX41-215ENST00000512431 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
DDX41-215ENST00000512431 TNIP1Q15025 636 aa16.72■□□□□ 0.27
DDX41-215ENST00000512431 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
DDX41-215ENST00000512431 PGAP2Q9UHJ9 254 aa16.72■□□□□ 0.27
DDX41-215ENST00000512431 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
DDX41-215ENST00000512431 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
DDX41-215ENST00000512431 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
DDX41-215ENST00000512431 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
DDX41-215ENST00000512431 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■■■□ 19.9
DDX41-215ENST00000512431 SUSD4Q5VX71 490 aa16.71■□□□□ 0.27
DDX41-215ENST00000512431 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
DDX41-215ENST00000512431 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.27
DDX41-215ENST00000512431 MYL6BP14649 208 aa16.7■□□□□ 0.26
DDX41-215ENST00000512431 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
DDX41-215ENST00000512431 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
DDX41-215ENST00000512431 H7C1D1 291 aa16.69■□□□□ 0.26
DDX41-215ENST00000512431 HUNKP57058 714 aa16.69■□□□□ 0.26
DDX41-215ENST00000512431 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
DDX41-215ENST00000512431 TTLL7Q6ZT98 887 aa16.69■□□□□ 0.26
DDX41-215ENST00000512431 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
DDX41-215ENST00000512431 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
DDX41-215ENST00000512431 PARP10Q53GL7 1025 aa16.68■□□□□ 0.26
DDX41-215ENST00000512431 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
DDX41-215ENST00000512431 BBOX1O75936 387 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 RAD17O75943 681 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 NTSR2O95665 410 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 NEFMP07197 916 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
DDX41-215ENST00000512431 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 MPNDQ8N594 471 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
DDX41-215ENST00000512431 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
DDX41-215ENST00000512431 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
DDX41-215ENST00000512431 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms