RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 STARD3NLO95772 234 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 MS4A1P11836 297 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
LDB2-214ENST00000512345 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
LDB2-214ENST00000512345 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
LDB2-214ENST00000512345 G2E3Q7L622 706 aa13.14□□□□□ -0.31
LDB2-214ENST00000512345 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
LDB2-214ENST00000512345 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
LDB2-214ENST00000512345 PTPRCP08575 1304 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 TRIM27P14373 513 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 NFIXQ14938 502 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 PDIA6Q15084 440 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
LDB2-214ENST00000512345 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
LDB2-214ENST00000512345 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
LDB2-214ENST00000512345 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
LDB2-214ENST00000512345 CHRNA5P30532 468 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
LDB2-214ENST00000512345 FLIIQ13045 1269 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
LDB2-214ENST00000512345 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
LDB2-214ENST00000512345 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
LDB2-214ENST00000512345 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
LDB2-214ENST00000512345 ERBB4Q15303 1308 aa13.12□□□□□ -0.31
LDB2-214ENST00000512345 A0A087WZG4 1122 aa13.11□□□□□ -0.31
LDB2-214ENST00000512345 ANXA1P04083 346 aa13.11□□□□□ -0.31
LDB2-214ENST00000512345 SERPINB2P05120 415 aa13.11□□□□□ -0.31
LDB2-214ENST00000512345 RLBP1P12271 317 aa13.11□□□□□ -0.31
LDB2-214ENST00000512345 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
LDB2-214ENST00000512345 KIF3CO14782 793 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 A1BGP04217 495 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 MYL6BP14649 208 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
LDB2-214ENST00000512345 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
LDB2-214ENST00000512345 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
LDB2-214ENST00000512345 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
LDB2-214ENST00000512345 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 ABCC4O15439 1325 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
LDB2-214ENST00000512345 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
LDB2-214ENST00000512345 NUBP1P53384 320 aa13.08□□□□□ -0.32
LDB2-214ENST00000512345 MVPQ14764 893 aaKnown RBP13.08□□□□□ -0.32
LDB2-214ENST00000512345 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
LDB2-214ENST00000512345 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.32
LDB2-214ENST00000512345 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
LDB2-214ENST00000512345 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
LDB2-214ENST00000512345 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
LDB2-214ENST00000512345 F6X3S4 739 aa13.07□□□□□ -0.32
LDB2-214ENST00000512345 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
LDB2-214ENST00000512345 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
LDB2-214ENST00000512345 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
LDB2-214ENST00000512345 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
LDB2-214ENST00000512345 XAGE3Q8WTP9 111 aa13.07□□□□□ -0.32
LDB2-214ENST00000512345 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
LDB2-214ENST00000512345 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
LDB2-214ENST00000512345 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
LDB2-214ENST00000512345 HSPA6P17066 643 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 GSE1Q14687 1217 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
LDB2-214ENST00000512345 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
LDB2-214ENST00000512345 H0YIN7 160 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 NMRK2Q9NPI5 230 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
LDB2-214ENST00000512345 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
LDB2-214ENST00000512345 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
LDB2-214ENST00000512345 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 MAP3K2Q9Y2U5 619 aa13.04□□□□□ -0.32
LDB2-214ENST00000512345 TOMM70O94826 608 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms