RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
DDR1-267ENST00000512336 HLFQ16534 295 aa16.41■□□□□ 0.22
DDR1-267ENST00000512336 NBPF10Q6P3W6 841 aaKnown RBP16.41■□□□□ 0.22
DDR1-267ENST00000512336 NBPF15Q8N660 670 aa16.41■□□□□ 0.22
DDR1-267ENST00000512336 ABCC12Q96J65 1359 aa16.4■□□□□ 0.22
DDR1-267ENST00000512336 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
DDR1-267ENST00000512336 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
DDR1-267ENST00000512336 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
DDR1-267ENST00000512336 MCOLN1Q9GZU1 580 aa16.4■□□□□ 0.22
DDR1-267ENST00000512336 RGL2O15211 777 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 MAP2K2P36507 400 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 TRPM7Q96QT4 1865 aa16.39■□□□□ 0.21
DDR1-267ENST00000512336 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
DDR1-267ENST00000512336 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
DDR1-267ENST00000512336 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
DDR1-267ENST00000512336 CA12O43570 354 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
DDR1-267ENST00000512336 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
DDR1-267ENST00000512336 SAPCD2Q86UD0 394 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
DDR1-267ENST00000512336 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
DDR1-267ENST00000512336 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
DDR1-267ENST00000512336 DGKZQ13574 1117 aa16.35■□□□□ 0.21
DDR1-267ENST00000512336 MCM10Q7L590 875 aa16.35■□□□□ 0.21
DDR1-267ENST00000512336 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
DDR1-267ENST00000512336 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
DDR1-267ENST00000512336 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
DDR1-267ENST00000512336 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
DDR1-267ENST00000512336 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
DDR1-267ENST00000512336 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
DDR1-267ENST00000512336 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
DDR1-267ENST00000512336 GLIS2Q9BZE0 524 aaPredicted RBP16.34■□□□□ 0.21
DDR1-267ENST00000512336 RIC1Q4ADV7 1423 aa16.34■□□□□ 0.21
DDR1-267ENST00000512336 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 AOC3Q16853 763 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
DDR1-267ENST00000512336 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 CASP8AP2Q9UKL3 1982 aa16.33■□□□□ 0.2
DDR1-267ENST00000512336 GPTP24298 496 aa16.32■□□□□ 0.2
DDR1-267ENST00000512336 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
DDR1-267ENST00000512336 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
DDR1-267ENST00000512336 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
DDR1-267ENST00000512336 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
DDR1-267ENST00000512336 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
DDR1-267ENST00000512336 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
DDR1-267ENST00000512336 CXCL9Q07325 125 aa16.31■□□□□ 0.2
DDR1-267ENST00000512336 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
DDR1-267ENST00000512336 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 LAMB4A4D0S4 1761 aa16.3■□□□□ 0.2
DDR1-267ENST00000512336 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
DDR1-267ENST00000512336 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
DDR1-267ENST00000512336 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
DDR1-267ENST00000512336 ZNRF3Q9ULT6 936 aa16.29■□□□□ 0.2
DDR1-267ENST00000512336 NUP98P52948 1817 aa16.29■□□□□ 0.2
DDR1-267ENST00000512336 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
DDR1-267ENST00000512336 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
DDR1-267ENST00000512336 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
DDR1-267ENST00000512336 PDE4DIPQ5VU43 2346 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 NTSR2O95665 410 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 NOGQ13253 232 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
DDR1-267ENST00000512336 TRPM4Q8TD43 1214 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 VPS33BQ9H267 617 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
DDR1-267ENST00000512336 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
DDR1-267ENST00000512336 MYL6BP14649 208 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 SOX10P56693 466 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 HUNKP57058 714 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
DDR1-267ENST00000512336 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
DDR1-267ENST00000512336 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
DDR1-267ENST00000512336 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
DDR1-267ENST00000512336 SHTN1A0MZ66 631 aa16.25■□□□□ 0.19
DDR1-267ENST00000512336 RAD17O75943 681 aa16.25■□□□□ 0.19
DDR1-267ENST00000512336 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
DDR1-267ENST00000512336 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
DDR1-267ENST00000512336 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
DDR1-267ENST00000512336 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
DDR1-267ENST00000512336 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
DDR1-267ENST00000512336 ABCC4O15439 1325 aa16.24■□□□□ 0.19
DDR1-267ENST00000512336 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
DDR1-267ENST00000512336 DLK2Q6UY11 383 aa16.24■□□□□ 0.19
DDR1-267ENST00000512336 USP48Q86UV5 1035 aa16.24■□□□□ 0.19
DDR1-267ENST00000512336 NLRP3Q96P20 1036 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms