RNA–Protein interactions for RNA: ENST00000512248.5

GIN1-205, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 1 (best)

Gene GIN1, Length 3,325 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-205ENST00000512248 DNAAF4Q8WXU2 420 aa9.69□□□□□ -0.86
GIN1-205ENST00000512248 FTOQ9C0B1 505 aaKnown RBP eCLIP9.69□□□□□ -0.86
GIN1-205ENST00000512248 ATP6V1DQ9Y5K8 247 aa9.69□□□□□ -0.86
GIN1-205ENST00000512248 ZSCAN20P17040 1043 aaPredicted RBP9.68□□□□□ -0.86
GIN1-205ENST00000512248 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
GIN1-205ENST00000512248 FUCA2Q9BTY2 467 aa9.68□□□□□ -0.86
GIN1-205ENST00000512248 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
GIN1-205ENST00000512248 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
GIN1-205ENST00000512248 MAP3K11Q16584 847 aa9.68□□□□□ -0.86
GIN1-205ENST00000512248 PRIMPOLQ96LW4 560 aa9.68□□□□□ -0.86
GIN1-205ENST00000512248 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
GIN1-205ENST00000512248 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
GIN1-205ENST00000512248 NR1I2O75469 434 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 GUCY1B3Q02153 619 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 CREB3L3Q68CJ9 461 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 SPATA32Q96LK8 384 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 FSD1Q9BTV5 496 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 CBX8Q9HC52 389 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 MRVI1Q9Y6F6 885 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 KRT85P78386 507 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 CCDC129Q6ZRS4 1044 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 AMOTL2Q9Y2J4 779 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 GLRX3O76003 335 aaKnown RBP9.67□□□□□ -0.86
GIN1-205ENST00000512248 MTERF4Q7Z6M4 381 aaKnown RBP9.67□□□□□ -0.86
GIN1-205ENST00000512248 SMAP1Q8IYB5 467 aaPredicted RBP9.67□□□□□ -0.86
GIN1-205ENST00000512248 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 CEP170BQ9Y4F5 1589 aaPredicted RBP9.67□□□□□ -0.86
GIN1-205ENST00000512248 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
GIN1-205ENST00000512248 LETM1O95202 739 aaPredicted RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 HOXC9P31274 260 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 EAF2Q96CJ1 260 aaPredicted RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 SEC62Q99442 399 aaKnown RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 ECHDC1Q9NTX5 307 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 TNNT1P13805 278 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 TEFQ10587 303 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 TMEM87AQ8NBN3 555 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
GIN1-205ENST00000512248 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 MYL6BP14649 208 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 POLA2Q14181 598 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 FAM200AQ8TCP9 573 aa9.66□□□□□ -0.86
GIN1-205ENST00000512248 REREQ9P2R6 1566 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 ZNF165P49910 485 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 CCDC144BQ3MJ40 725 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 BLOC1S2Q6QNY1 142 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 CHST3Q7LGC8 479 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 CCDC144CPQ8IYA2 1237 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 RUFY2Q8WXA3 655 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 RNF216Q9NWF9 866 aaPredicted RBP9.65□□□□□ -0.86
GIN1-205ENST00000512248 FLT4P35916 1363 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 USP27XA6NNY8 438 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 GOLGA6L6A8MZA4 724 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 SLC27A2O14975 620 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 FAM193AP78312 1265 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 VPS53Q5VIR6 699 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
GIN1-205ENST00000512248 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.86
GIN1-205ENST00000512248 SPTLC3Q9NUV7 552 aa9.65□□□□□ -0.86
GIN1-205ENST00000512248 IGSF1Q8N6C5 1336 aa9.65□□□□□ -0.87
GIN1-205ENST00000512248 EIF4A1P60842 406 aaKnown RBP9.64□□□□□ -0.87
GIN1-205ENST00000512248 NECTIN1Q15223 517 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 FAM43BQ6ZT52 329 aaPredicted RBP9.64□□□□□ -0.87
GIN1-205ENST00000512248 TMEM51Q9NW97 253 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 USP6P35125 1406 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 H3BQV1 296 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 CCT2P78371 535 aaKnown RBP9.64□□□□□ -0.87
GIN1-205ENST00000512248 G3BP1Q13283 466 aaKnown RBP eCLIP9.64□□□□□ -0.87
GIN1-205ENST00000512248 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 PGBD1Q96JS3 809 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 FMNL2Q96PY5 1086 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 SASH1O94885 1247 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 RAB11FIP4Q86YS3 637 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 SUCLG2Q96I99 432 aa9.64□□□□□ -0.87
GIN1-205ENST00000512248 BICC1Q9H694 974 aaKnown RBP9.64□□□□□ -0.87
GIN1-205ENST00000512248 SSH2Q76I76 1423 aa9.63□□□□□ -0.87
GIN1-205ENST00000512248 IRX3P78415 501 aaPredicted RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 DMTNQ08495 405 aa9.63□□□□□ -0.87
GIN1-205ENST00000512248 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
GIN1-205ENST00000512248 ISM2Q6H9L7 571 aa9.63□□□□□ -0.87
GIN1-205ENST00000512248 ZNF530Q6P9A1 599 aaPredicted RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 ZNF771Q7L3S4 317 aaPredicted RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 LEO1Q8WVC0 666 aaPredicted RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 BRF1Q92994 677 aa9.63□□□□□ -0.87
GIN1-205ENST00000512248 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
GIN1-205ENST00000512248 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms