RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
HOXA4-203ENST00000511914 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
HOXA4-203ENST00000511914 CACNA1SQ13698 1873 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 TRIM27P14373 513 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 RASSF7Q02833 373 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
HOXA4-203ENST00000511914 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
HOXA4-203ENST00000511914 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
HOXA4-203ENST00000511914 PTPRCP08575 1304 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 TM4SF1P30408 202 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
HOXA4-203ENST00000511914 FTSJ3Q8IY81 847 aaKnown RBP13.22□□□□□ -0.29
HOXA4-203ENST00000511914 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
HOXA4-203ENST00000511914 COL15A1P39059 1388 aa13.21□□□□□ -0.29
HOXA4-203ENST00000511914 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
HOXA4-203ENST00000511914 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
HOXA4-203ENST00000511914 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
HOXA4-203ENST00000511914 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
HOXA4-203ENST00000511914 MRC1P22897 1456 aa13.21□□□□□ -0.3
HOXA4-203ENST00000511914 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 ANKRD31Q8N7Z5 1873 aa13.2□□□□□ -0.3
HOXA4-203ENST00000511914 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
HOXA4-203ENST00000511914 RLBP1P12271 317 aa13.19□□□□□ -0.3
HOXA4-203ENST00000511914 FSTL1Q12841 308 aa13.19□□□□□ -0.3
HOXA4-203ENST00000511914 NFIXQ14938 502 aa13.19□□□□□ -0.3
HOXA4-203ENST00000511914 PCNTO95613 3336 aa13.19□□□□□ -0.3
HOXA4-203ENST00000511914 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 NARFQ9UHQ1 456 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
HOXA4-203ENST00000511914 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
HOXA4-203ENST00000511914 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
HOXA4-203ENST00000511914 ABCC4O15439 1325 aa13.17□□□□□ -0.3
HOXA4-203ENST00000511914 SERPINB2P05120 415 aa13.17□□□□□ -0.3
HOXA4-203ENST00000511914 PRELPP51888 382 aa13.17□□□□□ -0.3
HOXA4-203ENST00000511914 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
HOXA4-203ENST00000511914 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
HOXA4-203ENST00000511914 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
HOXA4-203ENST00000511914 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
HOXA4-203ENST00000511914 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
HOXA4-203ENST00000511914 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
HOXA4-203ENST00000511914 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
HOXA4-203ENST00000511914 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
HOXA4-203ENST00000511914 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
HOXA4-203ENST00000511914 LMNB1P20700 586 aa13.15□□□□□ -0.3
HOXA4-203ENST00000511914 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
HOXA4-203ENST00000511914 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
HOXA4-203ENST00000511914 FER1L6Q2WGJ9 1857 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 H0YIN7 160 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 TTC5Q8N0Z6 440 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
HOXA4-203ENST00000511914 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
HOXA4-203ENST00000511914 KCNQ3O43525 872 aa13.13□□□□□ -0.31
HOXA4-203ENST00000511914 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
HOXA4-203ENST00000511914 ZNF622Q969S3 477 aaKnown RBP eCLIP13.13□□□□□ -0.31
HOXA4-203ENST00000511914 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
HOXA4-203ENST00000511914 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
HOXA4-203ENST00000511914 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
HOXA4-203ENST00000511914 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
HOXA4-203ENST00000511914 NFKBIEO00221 500 aa13.12□□□□□ -0.31
HOXA4-203ENST00000511914 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
HOXA4-203ENST00000511914 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
HOXA4-203ENST00000511914 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
HOXA4-203ENST00000511914 FLIIQ13045 1269 aa13.12□□□□□ -0.31
HOXA4-203ENST00000511914 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
HOXA4-203ENST00000511914 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
HOXA4-203ENST00000511914 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
HOXA4-203ENST00000511914 C21orf2O43822 256 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
HOXA4-203ENST00000511914 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
HOXA4-203ENST00000511914 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 ARFGEF2Q9Y6D5 1785 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
HOXA4-203ENST00000511914 STARD3NLO95772 234 aa13.1□□□□□ -0.31
HOXA4-203ENST00000511914 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
HOXA4-203ENST00000511914 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
HOXA4-203ENST00000511914 NPHP1O15259 732 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms