RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
COPS4-211ENST00000511891 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
COPS4-211ENST00000511891 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
COPS4-211ENST00000511891 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
COPS4-211ENST00000511891 NUP98P52948 1817 aa12.93□□□□□ -0.34
COPS4-211ENST00000511891 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
COPS4-211ENST00000511891 NPR1P16066 1061 aa12.93□□□□□ -0.34
COPS4-211ENST00000511891 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
COPS4-211ENST00000511891 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
COPS4-211ENST00000511891 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
COPS4-211ENST00000511891 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
COPS4-211ENST00000511891 COPS6Q7L5N1 327 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 RRAGCQ9HB90 399 aa12.92□□□□□ -0.34
COPS4-211ENST00000511891 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
COPS4-211ENST00000511891 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
COPS4-211ENST00000511891 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
COPS4-211ENST00000511891 TOMM70O94826 608 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 NTSR2O95665 410 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 HSPA6P17066 643 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 CLCN6P51797 869 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
COPS4-211ENST00000511891 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
COPS4-211ENST00000511891 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
COPS4-211ENST00000511891 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
COPS4-211ENST00000511891 ARFGEF2Q9Y6D5 1785 aa12.89□□□□□ -0.35
COPS4-211ENST00000511891 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
COPS4-211ENST00000511891 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 CCDC93Q567U6 631 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
COPS4-211ENST00000511891 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
COPS4-211ENST00000511891 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
COPS4-211ENST00000511891 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
COPS4-211ENST00000511891 HOXB7P09629 217 aa12.87□□□□□ -0.35
COPS4-211ENST00000511891 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
COPS4-211ENST00000511891 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
COPS4-211ENST00000511891 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
COPS4-211ENST00000511891 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
COPS4-211ENST00000511891 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
COPS4-211ENST00000511891 IFT57Q9NWB7 429 aa12.87□□□□□ -0.35
COPS4-211ENST00000511891 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
COPS4-211ENST00000511891 GNAI1P63096 354 aa12.86□□□□□ -0.35
COPS4-211ENST00000511891 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
COPS4-211ENST00000511891 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
COPS4-211ENST00000511891 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
COPS4-211ENST00000511891 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
COPS4-211ENST00000511891 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
COPS4-211ENST00000511891 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
COPS4-211ENST00000511891 POTECB2RU33 542 aa12.85□□□□□ -0.35
COPS4-211ENST00000511891 ANP32CO43423 234 aa12.85□□□□□ -0.35
COPS4-211ENST00000511891 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
COPS4-211ENST00000511891 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
COPS4-211ENST00000511891 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS4-211ENST00000511891 CALD1Q05682 793 aaKnown RBP12.85□□□□□ -0.35
COPS4-211ENST00000511891 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
COPS4-211ENST00000511891 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
COPS4-211ENST00000511891 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
COPS4-211ENST00000511891 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
COPS4-211ENST00000511891 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
COPS4-211ENST00000511891 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
COPS4-211ENST00000511891 NLRP3Q96P20 1036 aa12.84□□□□□ -0.35
COPS4-211ENST00000511891 TRMT112Q9UI30 125 aaKnown RBP12.84□□□□□ -0.35
COPS4-211ENST00000511891 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 PPEF1O14829 653 aaPredicted RBP12.83□□□□□ -0.36
COPS4-211ENST00000511891 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
COPS4-211ENST00000511891 CRAMP1Q96RY5 1269 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
COPS4-211ENST00000511891 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
COPS4-211ENST00000511891 SNED1Q8TER0 1413 aa12.82□□□□□ -0.36
COPS4-211ENST00000511891 APLP1P51693 650 aa12.82□□□□□ -0.36
COPS4-211ENST00000511891 HTRA3P83110 453 aa12.82□□□□□ -0.36
COPS4-211ENST00000511891 FSTL1Q12841 308 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms