RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 RTN1Q16799 776 aa11□□□□□ -0.65
SMN2-211ENST00000511873 RAB44Q7Z6P3 723 aaPredicted RBP11□□□□□ -0.65
SMN2-211ENST00000511873 ARXQ96QS3 562 aa10.99□□□□□ -0.65
SMN2-211ENST00000511873 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
SMN2-211ENST00000511873 RFX1P22670 979 aa10.98□□□□□ -0.65
SMN2-211ENST00000511873 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
SMN2-211ENST00000511873 FAM200AQ8TCP9 573 aa10.98□□□□□ -0.65
SMN2-211ENST00000511873 BHMTQ93088 406 aa10.97□□□□□ -0.65
SMN2-211ENST00000511873 TRIM11Q96F44 468 aa10.97□□□□□ -0.65
SMN2-211ENST00000511873 ADH7P40394 386 aa10.96□□□□□ -0.65
SMN2-211ENST00000511873 IER5Q5VY09 327 aa10.96□□□□□ -0.65
SMN2-211ENST00000511873 C1QTNF9BB2RNN3 333 aa10.95□□□□□ -0.66
SMN2-211ENST00000511873 M0R082 166 aa10.95□□□□□ -0.66
SMN2-211ENST00000511873 WEE1P30291 646 aa10.95□□□□□ -0.66
SMN2-211ENST00000511873 ZNF417Q8TAU3 575 aa10.95□□□□□ -0.66
SMN2-211ENST00000511873 ZNF587Q96SQ5 575 aaPredicted RBP10.95□□□□□ -0.66
SMN2-211ENST00000511873 SPDYE3A6NKU9 549 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 CD163Q86VB7 1156 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 STARD13Q9Y3M8 1113 aa10.94□□□□□ -0.66
SMN2-211ENST00000511873 FOXO3O43524 673 aa10.93□□□□□ -0.66
SMN2-211ENST00000511873 IGFLR1Q9H665 355 aa10.93□□□□□ -0.66
SMN2-211ENST00000511873 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
SMN2-211ENST00000511873 KLK14Q9P0G3 267 aa10.93□□□□□ -0.66
SMN2-211ENST00000511873 LOC100996750A0A140TA64 210 aa10.92□□□□□ -0.66
SMN2-211ENST00000511873 BAG6P46379 1132 aa10.92□□□□□ -0.66
SMN2-211ENST00000511873 MICALL1Q8N3F8 863 aa10.92□□□□□ -0.66
SMN2-211ENST00000511873 KRTAP4-6Q9BYQ5 205 aa10.92□□□□□ -0.66
SMN2-211ENST00000511873 DMGDHQ9UI17 866 aaKnown RBP10.92□□□□□ -0.66
SMN2-211ENST00000511873 ALBP02768 609 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 CHRNA4P43681 627 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 DGKZQ13574 1117 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 PNMA5Q96PV4 448 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 GSX2Q9BZM3 304 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 UBE2OQ9C0C9 1292 aaKnown RBP10.91□□□□□ -0.66
SMN2-211ENST00000511873 PRDM6Q9NQX0 595 aa10.91□□□□□ -0.66
SMN2-211ENST00000511873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMN2-211ENST00000511873 NOVA2Q9UNW9 492 aaKnown RBP10.91□□□□□ -0.66
SMN2-211ENST00000511873 ADAM23O75077 832 aa10.9□□□□□ -0.66
SMN2-211ENST00000511873 EPB42P16452 691 aa10.9□□□□□ -0.66
SMN2-211ENST00000511873 CCINQ13939 588 aa10.9□□□□□ -0.66
SMN2-211ENST00000511873 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
SMN2-211ENST00000511873 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
SMN2-211ENST00000511873 PRRT3Q5FWE3 981 aa10.89□□□□□ -0.67
SMN2-211ENST00000511873 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
SMN2-211ENST00000511873 INPP5BP32019 993 aa10.88□□□□□ -0.67
SMN2-211ENST00000511873 IDH3AP50213 366 aa10.88□□□□□ -0.67
SMN2-211ENST00000511873 COL9A3Q14050 684 aaPredicted RBP10.88□□□□□ -0.67
SMN2-211ENST00000511873 C11orf91Q3C1V1 193 aa10.88□□□□□ -0.67
SMN2-211ENST00000511873 C20orf204Q6ZNR8 217 aa10.88□□□□□ -0.67
SMN2-211ENST00000511873 LILRB5O75023 590 aa10.87□□□□□ -0.67
SMN2-211ENST00000511873 MICAL2O94851 1124 aa10.86□□□□□ -0.67
SMN2-211ENST00000511873 TRIM28Q13263 835 aaKnown RBP10.86□□□□□ -0.67
SMN2-211ENST00000511873 MYO19Q96H55 970 aa10.86□□□□□ -0.67
SMN2-211ENST00000511873 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
SMN2-211ENST00000511873 FURINP09958 794 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 NID1P14543 1247 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 NFKB1P19838 968 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 ARSDP51689 593 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 PRIMPOLQ96LW4 560 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 ZMYND15Q9H091 742 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 DNAJB12Q9NXW2 375 aaKnown RBP10.85□□□□□ -0.67
SMN2-211ENST00000511873 SLC6A14Q9UN76 642 aa10.85□□□□□ -0.67
SMN2-211ENST00000511873 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
SMN2-211ENST00000511873 ELOAQ14241 798 aaKnown RBP10.84□□□□□ -0.67
SMN2-211ENST00000511873 IFT43Q96FT9 208 aa10.84□□□□□ -0.67
SMN2-211ENST00000511873 GRNP28799 593 aaKnown RBP10.83□□□□□ -0.68
SMN2-211ENST00000511873 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
SMN2-211ENST00000511873 NUDT8Q8WV74 236 aa10.83□□□□□ -0.68
SMN2-211ENST00000511873 JPH1Q9HDC5 661 aaPredicted RBP10.83□□□□□ -0.68
SMN2-211ENST00000511873 C11orf16Q9NQ32 467 aa10.83□□□□□ -0.68
SMN2-211ENST00000511873 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
SMN2-211ENST00000511873 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 PRMT3O60678 531 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 APBA3O96018 575 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 GATA4P43694 442 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
SMN2-211ENST00000511873 PCSK7Q16549 785 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 ZMIZ1Q9ULJ6 1067 aa10.82□□□□□ -0.68
SMN2-211ENST00000511873 SRPK2P78362 688 aaKnown RBP10.81□□□□□ -0.68
SMN2-211ENST00000511873 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
SMN2-211ENST00000511873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.8□□□□□ -0.68
SMN2-211ENST00000511873 MAP3K6O95382 1288 aa10.8□□□□□ -0.68
SMN2-211ENST00000511873 TARSP26639 723 aaKnown RBP10.8□□□□□ -0.68
SMN2-211ENST00000511873 COX20Q5RI15 118 aa10.8□□□□□ -0.68
SMN2-211ENST00000511873 PSAPL1Q6NUJ1 521 aa10.8□□□□□ -0.68
SMN2-211ENST00000511873 OPLAHO14841 1288 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 RGS9O75916 674 aaPredicted RBP10.79□□□□□ -0.68
SMN2-211ENST00000511873 SASH3O75995 380 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 DOC2BQ14184 412 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 STK32AQ8WU08 396 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
SMN2-211ENST00000511873 RTCBQ9Y3I0 505 aaKnown RBP10.79□□□□□ -0.68
SMN2-211ENST00000511873 RARAP10276 462 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms