RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
YIPF3-215ENST00000511831 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
YIPF3-215ENST00000511831 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
YIPF3-215ENST00000511831 MCM10Q7L590 875 aa13.84□□□□□ -0.19
YIPF3-215ENST00000511831 BEGAINQ9BUH8 593 aa13.84□□□□□ -0.19
YIPF3-215ENST00000511831 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
YIPF3-215ENST00000511831 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
YIPF3-215ENST00000511831 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
YIPF3-215ENST00000511831 ECE1P42892 770 aa13.83□□□□□ -0.2
YIPF3-215ENST00000511831 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
YIPF3-215ENST00000511831 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
YIPF3-215ENST00000511831 PSMD1Q99460 953 aa13.83□□□□□ -0.2
YIPF3-215ENST00000511831 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
YIPF3-215ENST00000511831 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
YIPF3-215ENST00000511831 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
YIPF3-215ENST00000511831 RGS19P49795 217 aa13.81□□□□□ -0.2
YIPF3-215ENST00000511831 CRY2Q49AN0 593 aa13.81□□□□□ -0.2
YIPF3-215ENST00000511831 MCOLN1Q9GZU1 580 aa13.81□□□□□ -0.2
YIPF3-215ENST00000511831 GPTP24298 496 aa13.8□□□□□ -0.2
YIPF3-215ENST00000511831 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
YIPF3-215ENST00000511831 RPGRQ92834 1020 aaKnown RBP13.8□□□□□ -0.2
YIPF3-215ENST00000511831 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
YIPF3-215ENST00000511831 TRPM7Q96QT4 1865 aa13.8□□□□□ -0.2
YIPF3-215ENST00000511831 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
YIPF3-215ENST00000511831 AOC3Q16853 763 aa13.79□□□□□ -0.2
YIPF3-215ENST00000511831 USP50Q70EL3 339 aaPredicted RBP13.79□□□□□ -0.2
YIPF3-215ENST00000511831 NIM1KQ8IY84 436 aa13.79□□□□□ -0.2
YIPF3-215ENST00000511831 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
YIPF3-215ENST00000511831 ZNF408Q9H9D4 720 aa13.79□□□□□ -0.2
YIPF3-215ENST00000511831 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
YIPF3-215ENST00000511831 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
YIPF3-215ENST00000511831 PPEF1O14829 653 aaPredicted RBP13.78□□□□□ -0.2
YIPF3-215ENST00000511831 PPIP5K2O43314 1243 aa13.78□□□□□ -0.2
YIPF3-215ENST00000511831 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
YIPF3-215ENST00000511831 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
YIPF3-215ENST00000511831 RIC1Q4ADV7 1423 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 SAPCD2Q86UD0 394 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 ZIC5Q96T25 663 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 ZBTB3Q9H5J0 574 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 GPRC5DQ9NZD1 345 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 CASP8AP2Q9UKL3 1982 aa13.77□□□□□ -0.21
YIPF3-215ENST00000511831 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 TNRC18O15417 2968 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-215ENST00000511831 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 RGL2O15211 777 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 HOXA10P31260 410 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-215ENST00000511831 MAP2K2P36507 400 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-215ENST00000511831 DGKZQ13574 1117 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
YIPF3-215ENST00000511831 ADARB2Q9NS39 739 aaKnown RBP13.76□□□□□ -0.21
YIPF3-215ENST00000511831 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
YIPF3-215ENST00000511831 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
YIPF3-215ENST00000511831 MYL6BP14649 208 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
YIPF3-215ENST00000511831 CXCL9Q07325 125 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 DLK2Q6UY11 383 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
YIPF3-215ENST00000511831 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
YIPF3-215ENST00000511831 NUP98P52948 1817 aa13.74□□□□□ -0.21
YIPF3-215ENST00000511831 NTSR2O95665 410 aa13.74□□□□□ -0.21
YIPF3-215ENST00000511831 CRAMP1Q96RY5 1269 aa13.74□□□□□ -0.21
YIPF3-215ENST00000511831 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
YIPF3-215ENST00000511831 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-215ENST00000511831 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-215ENST00000511831 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
YIPF3-215ENST00000511831 CA12O43570 354 aa13.72□□□□□ -0.21
YIPF3-215ENST00000511831 RAD17O75943 681 aa13.72□□□□□ -0.21
YIPF3-215ENST00000511831 SOX10P56693 466 aa13.72□□□□□ -0.21
YIPF3-215ENST00000511831 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
YIPF3-215ENST00000511831 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
YIPF3-215ENST00000511831 ZNRF3Q9ULT6 936 aa13.72□□□□□ -0.21
YIPF3-215ENST00000511831 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
YIPF3-215ENST00000511831 ABCC4O15439 1325 aa13.71□□□□□ -0.21
YIPF3-215ENST00000511831 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
YIPF3-215ENST00000511831 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
YIPF3-215ENST00000511831 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.21
YIPF3-215ENST00000511831 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
YIPF3-215ENST00000511831 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
YIPF3-215ENST00000511831 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
YIPF3-215ENST00000511831 THUMPD2Q9BTF0 503 aaKnown RBP13.7□□□□□ -0.22
YIPF3-215ENST00000511831 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
YIPF3-215ENST00000511831 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
YIPF3-215ENST00000511831 HUNKP57058 714 aa13.69□□□□□ -0.22
YIPF3-215ENST00000511831 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
YIPF3-215ENST00000511831 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
YIPF3-215ENST00000511831 HHIPL1Q96JK4 782 aa13.69□□□□□ -0.22
YIPF3-215ENST00000511831 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
YIPF3-215ENST00000511831 YDJCA8MPS7 323 aa13.68□□□□□ -0.22
YIPF3-215ENST00000511831 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
YIPF3-215ENST00000511831 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
YIPF3-215ENST00000511831 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
YIPF3-215ENST00000511831 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
YIPF3-215ENST00000511831 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
YIPF3-215ENST00000511831 CNOT7Q9UIV1 285 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms