RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 E9PSI1 815 aa12.81□□□□□ -0.36
PTPN20-225ENST00000511769 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
PTPN20-225ENST00000511769 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-225ENST00000511769 RTF1Q92541 710 aaKnown RBP12.81□□□□□ -0.36
PTPN20-225ENST00000511769 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
PTPN20-225ENST00000511769 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-225ENST00000511769 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
PTPN20-225ENST00000511769 NOGQ13253 232 aa12.8□□□□□ -0.36
PTPN20-225ENST00000511769 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
PTPN20-225ENST00000511769 HHIPL1Q96JK4 782 aa12.8□□□□□ -0.36
PTPN20-225ENST00000511769 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
PTPN20-225ENST00000511769 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPN20-225ENST00000511769 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
PTPN20-225ENST00000511769 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
PTPN20-225ENST00000511769 SAGE1Q9NXZ1 904 aa12.79□□□□□ -0.36
PTPN20-225ENST00000511769 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-225ENST00000511769 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
PTPN20-225ENST00000511769 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
PTPN20-225ENST00000511769 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
PTPN20-225ENST00000511769 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
PTPN20-225ENST00000511769 TRPA1O75762 1119 aa12.77□□□□□ -0.37
PTPN20-225ENST00000511769 PHKG2P15735 406 aa12.77□□□□□ -0.37
PTPN20-225ENST00000511769 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-225ENST00000511769 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
PTPN20-225ENST00000511769 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
PTPN20-225ENST00000511769 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-225ENST00000511769 IL16Q14005 1332 aa12.77□□□□□ -0.37
PTPN20-225ENST00000511769 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
PTPN20-225ENST00000511769 PDE6BP35913 854 aa12.76□□□□□ -0.37
PTPN20-225ENST00000511769 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
PTPN20-225ENST00000511769 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-225ENST00000511769 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
PTPN20-225ENST00000511769 GPC2Q8N158 579 aa12.76□□□□□ -0.37
PTPN20-225ENST00000511769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN20-225ENST00000511769 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
PTPN20-225ENST00000511769 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-225ENST00000511769 GNAI1P63096 354 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
PTPN20-225ENST00000511769 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 RNF186Q9NXI6 227 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 CACNA1SQ13698 1873 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
PTPN20-225ENST00000511769 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
PTPN20-225ENST00000511769 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
PTPN20-225ENST00000511769 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
PTPN20-225ENST00000511769 MCM10Q7L590 875 aa12.74□□□□□ -0.37
PTPN20-225ENST00000511769 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
PTPN20-225ENST00000511769 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
PTPN20-225ENST00000511769 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
PTPN20-225ENST00000511769 DLG5Q8TDM6 1919 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 FZD9O00144 591 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 EPS15P42566 896 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTPN20-225ENST00000511769 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
PTPN20-225ENST00000511769 BRIP1Q9BX63 1249 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 SZT2Q5T011 3432 aa12.73□□□□□ -0.37
PTPN20-225ENST00000511769 TJP1Q07157 1748 aa12.72□□□□□ -0.37
PTPN20-225ENST00000511769 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-225ENST00000511769 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-225ENST00000511769 USP50Q70EL3 339 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-225ENST00000511769 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
PTPN20-225ENST00000511769 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
PTPN20-225ENST00000511769 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
PTPN20-225ENST00000511769 SCNN1DP51172 638 aa12.71□□□□□ -0.37
PTPN20-225ENST00000511769 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-225ENST00000511769 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-225ENST00000511769 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 HUNKP57058 714 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 TEFQ10587 303 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
PTPN20-225ENST00000511769 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
PTPN20-225ENST00000511769 COL15A1P39059 1388 aa12.7□□□□□ -0.38
PTPN20-225ENST00000511769 FANCIQ9NVI1 1328 aa12.69□□□□□ -0.38
PTPN20-225ENST00000511769 HAX1O00165 279 aa12.69□□□□□ -0.38
PTPN20-225ENST00000511769 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
PTPN20-225ENST00000511769 TAF7Q15545 349 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-225ENST00000511769 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
PTPN20-225ENST00000511769 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
PTPN20-225ENST00000511769 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-225ENST00000511769 CHL1O00533 1208 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
PTPN20-225ENST00000511769 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-225ENST00000511769 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
PTPN20-225ENST00000511769 CABP4P57796 275 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms