RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 TSHZ3Q63HK5 1081 aa11.44□□□□□ -0.58
SUB1-209ENST00000511615 GLI3P10071 1580 aa11.44□□□□□ -0.58
SUB1-209ENST00000511615 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
SUB1-209ENST00000511615 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
SUB1-209ENST00000511615 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 UTYO14607 1347 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 GRM8O00222 908 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 ANXA1P04083 346 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 CYP2E1P05181 493 aaPredicted RBP11.43□□□□□ -0.58
SUB1-209ENST00000511615 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
SUB1-209ENST00000511615 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.583e-7■□□□□ 10.9
SUB1-209ENST00000511615 KLHL40Q2TBA0 621 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 RIC3Q7Z5B4 369 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 SEPT12Q8IYM1 358 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
SUB1-209ENST00000511615 PRAMEF22A3QJZ6 481 aa11.42□□□□□ -0.58
SUB1-209ENST00000511615 HIP1O00291 1037 aa11.42□□□□□ -0.58
SUB1-209ENST00000511615 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.58
SUB1-209ENST00000511615 HSPA4P34932 840 aa11.42□□□□□ -0.58
SUB1-209ENST00000511615 CUL4AQ13619 759 aa11.42□□□□□ -0.58
SUB1-209ENST00000511615 ECHDC1Q9NTX5 307 aa11.42□□□□□ -0.58
SUB1-209ENST00000511615 KCPQ6ZWJ8 1503 aa11.41□□□□□ -0.58
SUB1-209ENST00000511615 SGSM2O43147 1006 aa11.41□□□□□ -0.58
SUB1-209ENST00000511615 TMX3Q96JJ7 454 aa11.41□□□□□ -0.58
SUB1-209ENST00000511615 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
SUB1-209ENST00000511615 DIAPH3Q9NSV4 1193 aa11.41□□□□□ -0.58
SUB1-209ENST00000511615 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
SUB1-209ENST00000511615 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
SUB1-209ENST00000511615 PROSER3Q2NL68 480 aa11.4□□□□□ -0.58
SUB1-209ENST00000511615 MCTP1Q6DN14 999 aa11.4□□□□□ -0.58
SUB1-209ENST00000511615 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
SUB1-209ENST00000511615 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
SUB1-209ENST00000511615 RAD50Q92878 1312 aa11.4□□□□□ -0.58
SUB1-209ENST00000511615 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.59
SUB1-209ENST00000511615 EVI5LQ96CN4 794 aa11.4□□□□□ -0.59
SUB1-209ENST00000511615 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.59
SUB1-209ENST00000511615 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
SUB1-209ENST00000511615 KCNQ2O43526 872 aa11.39□□□□□ -0.59
SUB1-209ENST00000511615 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
SUB1-209ENST00000511615 STARD3NLO95772 234 aa11.39□□□□□ -0.59
SUB1-209ENST00000511615 ZGPATQ8N5A5 531 aaKnown RBP11.39□□□□□ -0.59
SUB1-209ENST00000511615 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
SUB1-209ENST00000511615 METTL22Q9BUU2 404 aaPredicted RBP11.39□□□□□ -0.59
SUB1-209ENST00000511615 UBR2Q8IWV8 1755 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
SUB1-209ENST00000511615 CWF19L2Q2TBE0 894 aaKnown RBP11.38□□□□□ -0.59
SUB1-209ENST00000511615 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
SUB1-209ENST00000511615 AACSQ86V21 672 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
SUB1-209ENST00000511615 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
SUB1-209ENST00000511615 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
SUB1-209ENST00000511615 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
SUB1-209ENST00000511615 FAM196AQ6ZSG2 479 aa11.37□□□□□ -0.59
SUB1-209ENST00000511615 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
SUB1-209ENST00000511615 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
SUB1-209ENST00000511615 ARXQ96QS3 562 aa11.37□□□□□ -0.59
SUB1-209ENST00000511615 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
SUB1-209ENST00000511615 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
SUB1-209ENST00000511615 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 MYL6BP14649 208 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
SUB1-209ENST00000511615 RXRBP28702 533 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 SIK1P57059 783 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 GCKRQ14397 625 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 ANKRD13DQ6ZTN6 518 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 ACSBG1Q96GR2 724 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 MYD88Q99836 296 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
SUB1-209ENST00000511615 BICC1Q9H694 974 aaKnown RBP11.36□□□□□ -0.59
SUB1-209ENST00000511615 LMBRD1Q9NUN5 540 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 ITGB4P16144 1822 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 BRD1O95696 1058 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 MBD3O95983 291 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 A1BGP04217 495 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 ZNF445P59923 1031 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 CWC27Q6UX04 472 aaKnown RBP11.36□□□□□ -0.59
SUB1-209ENST00000511615 DNAJC10Q8IXB1 793 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.36□□□□□ -0.59
SUB1-209ENST00000511615 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
SUB1-209ENST00000511615 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
SUB1-209ENST00000511615 COL15A1P39059 1388 aa11.35□□□□□ -0.59
SUB1-209ENST00000511615 A0A0G2JS52 829 aa11.35□□□□□ -0.59
SUB1-209ENST00000511615 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
SUB1-209ENST00000511615 ZSCAN31Q96LW9 406 aaPredicted RBP11.35□□□□□ -0.59
SUB1-209ENST00000511615 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
SUB1-209ENST00000511615 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
SUB1-209ENST00000511615 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
SUB1-209ENST00000511615 PRPF40AO75400 957 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms