RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	WWC3	Q9ULE0	1092 aa		11.53	□□□□□ -0.56
IFT122-223	ENST00000511498	EXOC6B	Q9Y2D4	811 aa		11.53	□□□□□ -0.56
IFT122-223	ENST00000511498	THRAP3	Q9Y2W1	955 aa	Known RBP	11.53	□□□□□ -0.56
IFT122-223	ENST00000511498	KCP	Q6ZWJ8	1503 aa		11.53	□□□□□ -0.56
IFT122-223	ENST00000511498	COL15A1	P39059	1388 aa		11.53	□□□□□ -0.56
IFT122-223	ENST00000511498	TNS2	Q63HR2	1409 aa		11.52	□□□□□ -0.56
IFT122-223	ENST00000511498	EPB41L2	O43491	1005 aa	Known RBP	11.52	□□□□□ -0.57
IFT122-223	ENST00000511498	SMARCA5	O60264	1052 aa	Predicted RBP	11.52	□□□□□ -0.57
IFT122-223	ENST00000511498	PPP1R42	Q7Z4L9	355 aa		11.52	□□□□□ -0.57
IFT122-223	ENST00000511498	NFATC2IP	Q8NCF5	419 aa		11.52	□□□□□ -0.57
IFT122-223	ENST00000511498	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.52	□□□□□ -0.57
IFT122-223	ENST00000511498	ITGB4	P16144	1822 aa		11.51	□□□□□ -0.57
IFT122-223	ENST00000511498	APBB1	O00213	710 aa		11.51	□□□□□ -0.57
IFT122-223	ENST00000511498	GRM8	O00222	908 aa		11.51	□□□□□ -0.57
IFT122-223	ENST00000511498	SRGAP3	O43295	1099 aa		11.51	□□□□□ -0.57
IFT122-223	ENST00000511498	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.51	□□□□□ -0.57
IFT122-223	ENST00000511498	TJP1	Q07157	1748 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	PDIA6	Q15084	440 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	RABEP1	Q15276	862 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	NFKBIB	Q15653	356 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	PROSER3	Q2NL68	480 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	RIC3	Q7Z5B4	369 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	RHPN1	Q8TCX5	695 aa		11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	ZNF496	Q96IT1	587 aa	Predicted RBP	11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	USP42	Q9H9J4	1324 aa	Known RBP	11.5	□□□□□ -0.57
IFT122-223	ENST00000511498	ERC2	O15083	957 aa		11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	SURF6	O75683	361 aa	Known RBP	11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	ANXA1	P04083	346 aa		11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	SLC39A6	Q13433	755 aa		11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	KLHL34	Q8N239	644 aa		11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	METTL22	Q9BUU2	404 aa	Predicted RBP	11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	TTC41P	Q6P2S7	1318 aa		11.49	□□□□□ -0.57
IFT122-223	ENST00000511498	PRAMEF22	A3QJZ6	481 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	TOMM70	O94826	608 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	MCC	P23508	829 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	EVA1C	P58658	441 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	GPATCH3	Q96I76	525 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	ANTXR1	Q9H6X2	564 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	CHMP5	Q9NZZ3	219 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	CIC	Q96RK0	1608 aa	Predicted RBP	11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	ANKRD36C	Q5JPF3	1778 aa		11.48	□□□□□ -0.57
IFT122-223	ENST00000511498	POLD1	P28340	1107 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	ZNF827	Q17R98	1081 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	PLBD2	Q8NHP8	589 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	SLC16A10	Q8TF71	515 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	XAGE3	Q8WTP9	111 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	USP26	Q9BXU7	913 aa		11.47	□□□□□ -0.57
IFT122-223	ENST00000511498	NEURL1B	A8MQ27	555 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498		K7ELQ4	463 aa	Predicted RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	HTRA3	P83110	453 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	AIMP1	Q12904	312 aa	Known RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	OS9	Q13438	667 aa	Predicted RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	CWF19L2	Q2TBE0	894 aa	Known RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	ANKRD13D	Q6ZTN6	518 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	COPS6	Q7L5N1	327 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	LRP10	Q7Z4F1	713 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	CNTROB	Q8N137	903 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	CLASRP	Q8N2M8	674 aa	Known RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	KIF2C	Q99661	725 aa		11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	SLK	Q9H2G2	1235 aa	Predicted RBP	11.46	□□□□□ -0.57
IFT122-223	ENST00000511498	DOT1L	Q8TEK3	1739 aa		11.46	□□□□□ -0.58
IFT122-223	ENST00000511498	NHS	Q6T4R5	1651 aa		11.46	□□□□□ -0.58
IFT122-223	ENST00000511498	GLRX3	O76003	335 aa	Known RBP	11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	IGKV5-2	P06315	115 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	MYL6B	P14649	208 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	ANAPC15	P60006	121 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	GCKR	Q14397	625 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	SUCLG2	Q96I99	432 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	ESYT1	Q9BSJ8	1104 aa		11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.45	□□□□□ -0.58
IFT122-223	ENST00000511498	TRIM6-TRIM34	B2RNG4	842 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	ST18	O60284	1047 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	DDB1	Q16531	1140 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	VSIG10	Q8N0Z9	540 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	MARCH10	Q8NA82	808 aa	Predicted RBP	11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	MYD88	Q99836	296 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	USP16	Q9Y5T5	823 aa		11.44	□□□□□ -0.58
IFT122-223	ENST00000511498	PTMS	P20962	102 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	CHML	P26374	656 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	PI4K2B	Q8TCG2	481 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	IL17RA	Q96F46	866 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	BICC1	Q9H694	974 aa	Known RBP	11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	IL1RAPL2	Q9NP60	686 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	TMOD3	Q9NYL9	352 aa		11.43	□□□□□ -0.58
IFT122-223	ENST00000511498	HSP90AA1	P07900	732 aa	Known RBP	11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	IFIT2	P09913	472 aa	Known RBP	11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	HSPA1A	P0DMV8	641 aa	Known RBP	11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	HSPA1B	P0DMV9	641 aa	Known RBP	11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	MCM2	P49736	904 aa		11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	RABL6	Q3YEC7	729 aa	Predicted RBP	11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	RUFY2	Q8WXA3	655 aa		11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	RILPL2	Q969X0	211 aa		11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	BCL11A	Q9H165	835 aa		11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	SPEF2	Q9C093	1822 aa		11.42	□□□□□ -0.58
IFT122-223	ENST00000511498	PNPLA7	Q6ZV29	1317 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms