RNA–Protein interactions for RNA: ENST00000511344.1

CSF1R-205, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 4

Gene CSF1R, Length 655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-205ENST00000511344 MYD88Q99836 296 aa23.17■■□□□ 1.3
CSF1R-205ENST00000511344 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
CSF1R-205ENST00000511344 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
CSF1R-205ENST00000511344 METTL22Q9BUU2 404 aaPredicted RBP23.16■■□□□ 1.3
CSF1R-205ENST00000511344 UTP14AQ9BVJ6 771 aaKnown RBP23.16■■□□□ 1.3
CSF1R-205ENST00000511344 RIC1Q4ADV7 1423 aa23.16■■□□□ 1.3
CSF1R-205ENST00000511344 H0YIN7 160 aa23.15■■□□□ 1.3
CSF1R-205ENST00000511344 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
CSF1R-205ENST00000511344 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
CSF1R-205ENST00000511344 PIM2Q9P1W9 311 aa23.14■■□□□ 1.29
CSF1R-205ENST00000511344 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
CSF1R-205ENST00000511344 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
CSF1R-205ENST00000511344 TRIM28Q13263 835 aaKnown RBP23.13■■□□□ 1.29
CSF1R-205ENST00000511344 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
CSF1R-205ENST00000511344 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
CSF1R-205ENST00000511344 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
CSF1R-205ENST00000511344 KLRG2A4D1S0 409 aaPredicted RBP23.12■■□□□ 1.29
CSF1R-205ENST00000511344 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
CSF1R-205ENST00000511344 BCS1LQ9Y276 419 aa23.12■■□□□ 1.29
CSF1R-205ENST00000511344 SRGNP10124 158 aa23.11■■□□□ 1.29
CSF1R-205ENST00000511344 SYNE4Q8N205 404 aa23.11■■□□□ 1.29
CSF1R-205ENST00000511344 SH3TC1Q8TE82 1336 aa23.1■■□□□ 1.29
CSF1R-205ENST00000511344 ARFGEF1Q9Y6D6 1849 aa23.1■■□□□ 1.29
CSF1R-205ENST00000511344 IGKV5-2P06315 115 aa23.1■■□□□ 1.29
CSF1R-205ENST00000511344 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
CSF1R-205ENST00000511344 DALRD3Q5D0E6 543 aaKnown RBP23.1■■□□□ 1.29
CSF1R-205ENST00000511344 DNAAF4Q8WXU2 420 aa23.1■■□□□ 1.29
CSF1R-205ENST00000511344 DDX60Q8IY21 1712 aaKnown RBP23.09■■□□□ 1.29
CSF1R-205ENST00000511344 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
CSF1R-205ENST00000511344 SLC10A5Q5PT55 438 aa23.09■■□□□ 1.29
CSF1R-205ENST00000511344 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
CSF1R-205ENST00000511344 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
CSF1R-205ENST00000511344 ZNF622Q969S3 477 aaKnown RBP eCLIP23.09■■□□□ 1.29
CSF1R-205ENST00000511344 LAMB2P55268 1798 aa23.09■■□□□ 1.29
CSF1R-205ENST00000511344 F6X3S4 739 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.29
CSF1R-205ENST00000511344 CRY2Q49AN0 593 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 STYK1Q6J9G0 422 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 MASTLQ96GX5 879 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 SMC4Q9NTJ3 1288 aa23.08■■□□□ 1.29
CSF1R-205ENST00000511344 CWC25Q9NXE8 425 aaPredicted RBP23.08■■□□□ 1.29
CSF1R-205ENST00000511344 UTRNP46939 3433 aa23.07■■□□□ 1.28
CSF1R-205ENST00000511344 CACNA1SQ13698 1873 aa23.07■■□□□ 1.28
CSF1R-205ENST00000511344 GRIN3BO60391 1043 aa23.07■■□□□ 1.28
CSF1R-205ENST00000511344 HCLS1P14317 486 aaPredicted RBP23.07■■□□□ 1.28
CSF1R-205ENST00000511344 RTL5Q5HYW3 569 aaPredicted RBP23.07■■□□□ 1.28
CSF1R-205ENST00000511344 TTLL6Q8N841 843 aa23.07■■□□□ 1.28
CSF1R-205ENST00000511344 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
CSF1R-205ENST00000511344 NPR1P16066 1061 aa23.06■■□□□ 1.28
CSF1R-205ENST00000511344 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
CSF1R-205ENST00000511344 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
CSF1R-205ENST00000511344 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
CSF1R-205ENST00000511344 SLX4Q8IY92 1834 aa23.04■■□□□ 1.28
CSF1R-205ENST00000511344 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
CSF1R-205ENST00000511344 CNKSR1Q969H4 720 aa23.04■■□□□ 1.28
CSF1R-205ENST00000511344 NLRP3Q96P20 1036 aa23.04■■□□□ 1.28
CSF1R-205ENST00000511344 PTPRCP08575 1304 aa23.04■■□□□ 1.28
CSF1R-205ENST00000511344 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
CSF1R-205ENST00000511344 IRS4O14654 1257 aaPredicted RBP23.02■■□□□ 1.28
CSF1R-205ENST00000511344 BEND3Q5T5X7 828 aa23.02■■□□□ 1.28
CSF1R-205ENST00000511344 JARID2Q92833 1246 aaPredicted RBP23.02■■□□□ 1.28
CSF1R-205ENST00000511344 RPGRQ92834 1020 aaKnown RBP23.02■■□□□ 1.28
CSF1R-205ENST00000511344 HOXA10P31260 410 aaPredicted RBP23.01■■□□□ 1.27
CSF1R-205ENST00000511344 GCKRQ14397 625 aa23.01■■□□□ 1.27
CSF1R-205ENST00000511344 CHD4Q14839 1912 aa23■■□□□ 1.27
CSF1R-205ENST00000511344 BRPF1P55201 1214 aaPredicted RBP23■■□□□ 1.27
CSF1R-205ENST00000511344 SLC4A10Q6U841 1118 aa23■■□□□ 1.27
CSF1R-205ENST00000511344 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
CSF1R-205ENST00000511344 NOB1Q9ULX3 412 aaKnown RBP22.99■■□□□ 1.27
CSF1R-205ENST00000511344 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
CSF1R-205ENST00000511344 C21orf2O43822 256 aa22.98■■□□□ 1.27
CSF1R-205ENST00000511344 ALDH1B1P30837 517 aa22.98■■□□□ 1.27
CSF1R-205ENST00000511344 ARHGAP27Q6ZUM4 889 aa22.98■■□□□ 1.27
CSF1R-205ENST00000511344 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
CSF1R-205ENST00000511344 CRAMP1Q96RY5 1269 aa22.98■■□□□ 1.27
CSF1R-205ENST00000511344 H7C1W4 665 aa22.97■■□□□ 1.27
CSF1R-205ENST00000511344 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
CSF1R-205ENST00000511344 ABCC4O15439 1325 aa22.97■■□□□ 1.27
CSF1R-205ENST00000511344 BCAR3O75815 825 aa22.96■■□□□ 1.27
CSF1R-205ENST00000511344 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
CSF1R-205ENST00000511344 C7orf43Q8WVR3 580 aa22.96■■□□□ 1.27
CSF1R-205ENST00000511344 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
CSF1R-205ENST00000511344 KIF16BQ96L93 1317 aa22.96■■□□□ 1.27
CSF1R-205ENST00000511344 PDE8AO60658 829 aa22.95■■□□□ 1.26
CSF1R-205ENST00000511344 ALDH1L1O75891 902 aa22.95■■□□□ 1.26
CSF1R-205ENST00000511344 HSP90B1P14625 803 aaKnown RBP22.95■■□□□ 1.26
CSF1R-205ENST00000511344 CASP7P55210 303 aa22.95■■□□□ 1.26
CSF1R-205ENST00000511344 YTHDC1Q96MU7 727 aaKnown RBP22.95■■□□□ 1.26
CSF1R-205ENST00000511344 TAF1P21675 1872 aa22.94■■□□□ 1.26
CSF1R-205ENST00000511344 COL4A1P02462 1669 aa22.94■■□□□ 1.26
CSF1R-205ENST00000511344 OLFM4Q6UX06 510 aa22.94■■□□□ 1.26
CSF1R-205ENST00000511344 MYH3P11055 1940 aa22.94■■□□□ 1.26
CSF1R-205ENST00000511344 FER1L6Q2WGJ9 1857 aa22.94■■□□□ 1.26
CSF1R-205ENST00000511344 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
CSF1R-205ENST00000511344 API5Q9BZZ5 524 aaKnown RBP22.93■■□□□ 1.26
CSF1R-205ENST00000511344 NFKBIEO00221 500 aa22.92■■□□□ 1.26
CSF1R-205ENST00000511344 GRM8O00222 908 aa22.92■■□□□ 1.26
CSF1R-205ENST00000511344 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
CSF1R-205ENST00000511344 RASSF7Q02833 373 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms