RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 SERTAD1Q9UHV2 236 aa7.19□□□□□ -1.26
PTPN13-208ENST00000511105 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
PTPN13-208ENST00000511105 MTUS2Q5JR59 1369 aa7.19□□□□□ -1.26
PTPN13-208ENST00000511105 TRAPPC8Q9Y2L5 1435 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 ARHGEF12Q9NZN5 1544 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 ATP2B4P23634 1241 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 C4orf17Q53FE4 359 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 NOM1Q5C9Z4 860 aaKnown RBP7.18□□□□□ -1.26
PTPN13-208ENST00000511105 LARP1Q6PKG0 1096 aaKnown RBP7.18□□□□□ -1.26
PTPN13-208ENST00000511105 CCDC125Q86Z20 511 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 ANKMY2Q8IV38 441 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 FHDC1Q9C0D6 1143 aaPredicted RBP7.18□□□□□ -1.26
PTPN13-208ENST00000511105 RUBCNLQ9H714 662 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 PHLDB1Q86UU1 1377 aa7.18□□□□□ -1.26
PTPN13-208ENST00000511105 FRMPD1Q5SYB0 1578 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 SPATA31C2B4DYI2 1134 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 F11P03951 625 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 RASA1P20936 1047 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 SERPINB4P48594 390 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 MAP7D1Q3KQU3 841 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 GGT6Q6P531 493 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 FAM200AQ8TCP9 573 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 TRIM52Q96A61 297 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
PTPN13-208ENST00000511105 CCNB3Q8WWL7 1395 aa7.17□□□□□ -1.26
PTPN13-208ENST00000511105 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
PTPN13-208ENST00000511105 CELA2BP08218 269 aaPredicted RBP7.16□□□□□ -1.26
PTPN13-208ENST00000511105 SCNN1DP51172 638 aa7.16□□□□□ -1.26
PTPN13-208ENST00000511105 NUCKS1Q9H1E3 243 aaKnown RBP7.16□□□□□ -1.26
PTPN13-208ENST00000511105 DKK1O94907 266 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 MSX1P28360 303 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 GDF10P55107 478 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 TLR1Q15399 786 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 EML3Q32P44 896 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 SIX5Q8N196 739 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 AIDAQ96BJ3 306 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 SIRT1Q96EB6 747 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 USP3Q9Y6I4 520 aa7.15□□□□□ -1.26
PTPN13-208ENST00000511105 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.26
PTPN13-208ENST00000511105 GPATCH8Q9UKJ3 1502 aaKnown RBP7.15□□□□□ -1.27
PTPN13-208ENST00000511105 H7C1W4 665 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 ATP10AO60312 1499 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
PTPN13-208ENST00000511105 PTPRMP28827 1452 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 PLA2G4AP47712 749 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 CLDN10P78369 228 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
PTPN13-208ENST00000511105 DPYDQ12882 1025 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 GNASQ5JWF2 1037 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 FOXR1Q6PIV2 292 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 POGZQ7Z3K3 1410 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 SIGLEC1Q9BZZ2 1709 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 PARP3Q9Y6F1 533 aa7.14□□□□□ -1.27
PTPN13-208ENST00000511105 RICTORQ6R327 1708 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 MYO5CQ9NQX4 1742 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 CDC42BPBQ9Y5S2 1711 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 ZFYVE16Q7Z3T8 1539 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 CCDC18Q5T9S5 1454 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 FYCO1Q9BQS8 1478 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 INHAP05111 366 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
PTPN13-208ENST00000511105 IRS1P35568 1242 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 ATP1A2P50993 1020 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
PTPN13-208ENST00000511105 ESCO1Q5FWF5 840 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 ACDQ96AP0 544 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 MRRFQ96E11 262 aaKnown RBP7.13□□□□□ -1.27
PTPN13-208ENST00000511105 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
PTPN13-208ENST00000511105 CNTNAP5Q8WYK1 1306 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 TMEM229AB2RXF0 380 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 MX2P20592 715 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 RASSF7Q02833 373 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 OCLNQ16625 522 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 TRERF1Q96PN7 1200 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 MADDQ8WXG6 1647 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
PTPN13-208ENST00000511105 VAMP1P23763 118 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 TBCELQ5QJ74 424 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTPN13-208ENST00000511105 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
PTPN13-208ENST00000511105 BCL2L13Q9BXK5 485 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 DNAAF2Q9NVR5 837 aaKnown RBP7.11□□□□□ -1.27
PTPN13-208ENST00000511105 CXXC1Q9P0U4 656 aaPredicted RBP7.11□□□□□ -1.27
PTPN13-208ENST00000511105 KIAA1024Q9UPX6 916 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 NOD1Q9Y239 953 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 PCDHGA11Q9Y5H2 935 aa7.11□□□□□ -1.27
PTPN13-208ENST00000511105 RIMS1Q86UR5 1692 aaKnown RBP7.11□□□□□ -1.27
PTPN13-208ENST00000511105 A0A1B0GTH6 734 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 KIF3BO15066 747 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 GDF11O95390 407 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 ITGAEP38570 1179 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 SMTNP53814 917 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 MAP3K10Q02779 954 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms