RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ANP32CO43423 234 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-223ENST00000511081 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 HOXA10P31260 410 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-223ENST00000511081 ERFEQ4G0M1 354 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
CLDND1-223ENST00000511081 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-223ENST00000511081 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 HSP90AB3PQ58FF7 597 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
CLDND1-223ENST00000511081 KDM2BQ8NHM5 1336 aa15.77■□□□□ 0.12
CLDND1-223ENST00000511081 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
CLDND1-223ENST00000511081 TOMM70O94826 608 aa15.77■□□□□ 0.12
CLDND1-223ENST00000511081 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
CLDND1-223ENST00000511081 HYPKQ9NX55 129 aa15.77■□□□□ 0.12
CLDND1-223ENST00000511081 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 ANKRD13DQ6ZTN6 518 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
CLDND1-223ENST00000511081 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
CLDND1-223ENST00000511081 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
CLDND1-223ENST00000511081 C8orf58Q8NAV2 365 aa15.75■□□□□ 0.11
CLDND1-223ENST00000511081 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
CLDND1-223ENST00000511081 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
CLDND1-223ENST00000511081 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
CLDND1-223ENST00000511081 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
CLDND1-223ENST00000511081 IL16Q14005 1332 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 CCDC93Q567U6 631 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 RTKN2Q8IZC4 609 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 ISCA1Q9BUE6 129 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 CHMP4AQ9BY43 222 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
CLDND1-223ENST00000511081 SENP3-EIF4A1A0A087X0R7 540 aa15.73■□□□□ 0.11
CLDND1-223ENST00000511081 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
CLDND1-223ENST00000511081 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
CLDND1-223ENST00000511081 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
CLDND1-223ENST00000511081 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
CLDND1-223ENST00000511081 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
CLDND1-223ENST00000511081 POTECB2RU33 542 aa15.72■□□□□ 0.11
CLDND1-223ENST00000511081 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-223ENST00000511081 HSPA6P17066 643 aa15.72■□□□□ 0.11
CLDND1-223ENST00000511081 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLDND1-223ENST00000511081 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
CLDND1-223ENST00000511081 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
CLDND1-223ENST00000511081 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
CLDND1-223ENST00000511081 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-223ENST00000511081 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
CLDND1-223ENST00000511081 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
CLDND1-223ENST00000511081 TSPYL6Q8N831 410 aa15.71■□□□□ 0.11
CLDND1-223ENST00000511081 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
CLDND1-223ENST00000511081 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
CLDND1-223ENST00000511081 PHAXQ9H814 394 aaKnown RBP15.71■□□□□ 0.11
CLDND1-223ENST00000511081 CCDC30Q5VVM6 783 aa15.7■□□□□ 0.1
CLDND1-223ENST00000511081 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
CLDND1-223ENST00000511081 PSMD1Q99460 953 aa15.7■□□□□ 0.1
CLDND1-223ENST00000511081 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
CLDND1-223ENST00000511081 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
CLDND1-223ENST00000511081 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
CLDND1-223ENST00000511081 BBOX1O75936 387 aa15.68■□□□□ 0.1
CLDND1-223ENST00000511081 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
CLDND1-223ENST00000511081 FSTL1Q12841 308 aa15.68■□□□□ 0.1
CLDND1-223ENST00000511081 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
CLDND1-223ENST00000511081 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
CLDND1-223ENST00000511081 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
CLDND1-223ENST00000511081 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
CLDND1-223ENST00000511081 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
CLDND1-223ENST00000511081 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
CLDND1-223ENST00000511081 LAMB2P55268 1798 aa15.67■□□□□ 0.1
CLDND1-223ENST00000511081 FZD9O00144 591 aa15.66■□□□□ 0.1
CLDND1-223ENST00000511081 IARSP41252 1262 aaKnown RBP15.66■□□□□ 0.1
CLDND1-223ENST00000511081 RIC3Q7Z5B4 369 aa15.66■□□□□ 0.1
CLDND1-223ENST00000511081 C16orf71Q8IYS4 520 aaPredicted RBP15.66■□□□□ 0.1
CLDND1-223ENST00000511081 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
CLDND1-223ENST00000511081 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-223ENST00000511081 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-223ENST00000511081 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CLDND1-223ENST00000511081 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-223ENST00000511081 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
CLDND1-223ENST00000511081 L3MBTL3Q96JM7 780 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-223ENST00000511081 VPS33BQ9H267 617 aa15.65■□□□□ 0.1
CLDND1-223ENST00000511081 ABCC4O15439 1325 aa15.65■□□□□ 0.1
CLDND1-223ENST00000511081 CCDC191Q8NCU4 936 aa15.64■□□□□ 0.09
CLDND1-223ENST00000511081 METTL22Q9BUU2 404 aaPredicted RBP15.64■□□□□ 0.09
CLDND1-223ENST00000511081 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
CLDND1-223ENST00000511081 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
CLDND1-223ENST00000511081 VAMP4O75379 141 aa15.63■□□□□ 0.09
CLDND1-223ENST00000511081 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
CLDND1-223ENST00000511081 APLP1P51693 650 aa15.63■□□□□ 0.09
CLDND1-223ENST00000511081 GRAPQ13588 217 aa15.63■□□□□ 0.09
CLDND1-223ENST00000511081 KSR2Q6VAB6 950 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms