RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 NLRP10Q86W26 655 aa13.24□□□□□ -0.29
NR1I3-227ENST00000510951 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
NR1I3-227ENST00000510951 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
NR1I3-227ENST00000510951 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
NR1I3-227ENST00000510951 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
NR1I3-227ENST00000510951 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-227ENST00000510951 NTSR2O95665 410 aa13.23□□□□□ -0.29
NR1I3-227ENST00000510951 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
NR1I3-227ENST00000510951 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-227ENST00000510951 ST5P78524 1137 aa13.23□□□□□ -0.29
NR1I3-227ENST00000510951 RTL5Q5HYW3 569 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-227ENST00000510951 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
NR1I3-227ENST00000510951 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
NR1I3-227ENST00000510951 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
NR1I3-227ENST00000510951 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 TAF1P21675 1872 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
NR1I3-227ENST00000510951 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.29
NR1I3-227ENST00000510951 SYNE4Q8N205 404 aa13.21□□□□□ -0.29
NR1I3-227ENST00000510951 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.29
NR1I3-227ENST00000510951 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
NR1I3-227ENST00000510951 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
NR1I3-227ENST00000510951 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
NR1I3-227ENST00000510951 TRMT112Q9UI30 125 aaKnown RBP13.21□□□□□ -0.29
NR1I3-227ENST00000510951 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
NR1I3-227ENST00000510951 TRIM27P14373 513 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
NR1I3-227ENST00000510951 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
NR1I3-227ENST00000510951 CHRNA5P30532 468 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
NR1I3-227ENST00000510951 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
NR1I3-227ENST00000510951 ABCC4O15439 1325 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 PLIN1O60240 522 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 HCLS1P14317 486 aaPredicted RBP13.18□□□□□ -0.3
NR1I3-227ENST00000510951 GCKRQ14397 625 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
NR1I3-227ENST00000510951 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
NR1I3-227ENST00000510951 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
NR1I3-227ENST00000510951 DPEP1P16444 411 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
NR1I3-227ENST00000510951 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 SLX4Q8IY92 1834 aa13.17□□□□□ -0.3
NR1I3-227ENST00000510951 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
NR1I3-227ENST00000510951 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
NR1I3-227ENST00000510951 PDE6BP35913 854 aa13.16□□□□□ -0.3
NR1I3-227ENST00000510951 COL4A1P02462 1669 aa13.15□□□□□ -0.3
NR1I3-227ENST00000510951 GRM8O00222 908 aa13.15□□□□□ -0.3
NR1I3-227ENST00000510951 RLBP1P12271 317 aa13.15□□□□□ -0.3
NR1I3-227ENST00000510951 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
NR1I3-227ENST00000510951 TGFB2P61812 414 aa13.15□□□□□ -0.3
NR1I3-227ENST00000510951 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
NR1I3-227ENST00000510951 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
NR1I3-227ENST00000510951 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
NR1I3-227ENST00000510951 H0YIN7 160 aa13.14□□□□□ -0.31
NR1I3-227ENST00000510951 H7C1W4 665 aa13.14□□□□□ -0.31
NR1I3-227ENST00000510951 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
NR1I3-227ENST00000510951 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
NR1I3-227ENST00000510951 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
NR1I3-227ENST00000510951 CCDC85AQ96PX6 553 aaPredicted RBP13.14□□□□□ -0.31
NR1I3-227ENST00000510951 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
NR1I3-227ENST00000510951 SRGNP10124 158 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 KCNA3P22001 575 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 CASP7P55210 303 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
NR1I3-227ENST00000510951 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
NR1I3-227ENST00000510951 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
NR1I3-227ENST00000510951 PDE8AO60658 829 aa13.12□□□□□ -0.31
NR1I3-227ENST00000510951 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
NR1I3-227ENST00000510951 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
NR1I3-227ENST00000510951 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-227ENST00000510951 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
NR1I3-227ENST00000510951 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
NR1I3-227ENST00000510951 NPR1P16066 1061 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
NR1I3-227ENST00000510951 CTSWP56202 376 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 MEIS3Q99687 375 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms