RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 SUZ12Q15022 739 aaKnown RBP10.98□□□□□ -0.65
NUP54-210ENST00000510884 TGFBR3LH3BV60 316 aa10.97□□□□□ -0.65
NUP54-210ENST00000510884 FOXO3O43524 673 aa10.97□□□□□ -0.65
NUP54-210ENST00000510884 LGR5O75473 907 aa10.97□□□□□ -0.65
NUP54-210ENST00000510884 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
NUP54-210ENST00000510884 ALAS2P22557 587 aa10.96□□□□□ -0.65
NUP54-210ENST00000510884 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
NUP54-210ENST00000510884 BCS1LQ9Y276 419 aa10.96□□□□□ -0.65
NUP54-210ENST00000510884 RAB44Q7Z6P3 723 aaPredicted RBP10.95□□□□□ -0.66
NUP54-210ENST00000510884 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
NUP54-210ENST00000510884 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
NUP54-210ENST00000510884 ADH7P40394 386 aa10.94□□□□□ -0.66
NUP54-210ENST00000510884 EFCC1Q9HA90 598 aa10.94□□□□□ -0.66
NUP54-210ENST00000510884 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
NUP54-210ENST00000510884 STARD13Q9Y3M8 1113 aa10.94□□□□□ -0.66
NUP54-210ENST00000510884 QTRT2Q9H974 415 aaKnown RBP10.93□□□□□ -0.66
NUP54-210ENST00000510884 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
NUP54-210ENST00000510884 MYO19Q96H55 970 aa10.92□□□□□ -0.66
NUP54-210ENST00000510884 RFX1P22670 979 aa10.91□□□□□ -0.66
NUP54-210ENST00000510884 ELOAQ14241 798 aaKnown RBP10.91□□□□□ -0.66
NUP54-210ENST00000510884 LOC100996750A0A140TA64 210 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 ALBP02768 609 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 COL9A3Q14050 684 aaPredicted RBP10.9□□□□□ -0.66
NUP54-210ENST00000510884 CDCA8Q53HL2 280 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 BHMTQ93088 406 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 KRTAP4-6Q9BYQ5 205 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 ZMIZ1Q9ULJ6 1067 aa10.9□□□□□ -0.66
NUP54-210ENST00000510884 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
NUP54-210ENST00000510884 M0R082 166 aa10.89□□□□□ -0.67
NUP54-210ENST00000510884 GRNP28799 593 aaKnown RBP10.89□□□□□ -0.67
NUP54-210ENST00000510884 SRPK2P78362 688 aaKnown RBP10.89□□□□□ -0.67
NUP54-210ENST00000510884 SWI5Q1ZZU3 235 aa10.89□□□□□ -0.67
NUP54-210ENST00000510884 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
NUP54-210ENST00000510884 ZNF587Q96SQ5 575 aaPredicted RBP10.89□□□□□ -0.67
NUP54-210ENST00000510884 GSX2Q9BZM3 304 aa10.89□□□□□ -0.67
NUP54-210ENST00000510884 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
NUP54-210ENST00000510884 INPP5BP32019 993 aa10.88□□□□□ -0.67
NUP54-210ENST00000510884 DGKZQ13574 1117 aa10.88□□□□□ -0.67
NUP54-210ENST00000510884 C20orf204Q6ZNR8 217 aa10.88□□□□□ -0.67
NUP54-210ENST00000510884 CD163Q86VB7 1156 aa10.88□□□□□ -0.67
NUP54-210ENST00000510884 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
NUP54-210ENST00000510884 C1QTNF9BB2RNN3 333 aa10.87□□□□□ -0.67
NUP54-210ENST00000510884 SPATA31C1P0DKV0 1188 aa10.87□□□□□ -0.67
NUP54-210ENST00000510884 EPB42P16452 691 aa10.87□□□□□ -0.67
NUP54-210ENST00000510884 IDH3AP50213 366 aa10.87□□□□□ -0.67
NUP54-210ENST00000510884 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
NUP54-210ENST00000510884 CHRNA4P43681 627 aa10.86□□□□□ -0.67
NUP54-210ENST00000510884 FAM69CQ0P6D2 419 aa10.86□□□□□ -0.67
NUP54-210ENST00000510884 CCINQ13939 588 aa10.86□□□□□ -0.67
NUP54-210ENST00000510884 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
NUP54-210ENST00000510884 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
NUP54-210ENST00000510884 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 BAG6P46379 1132 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 ARSDP51689 593 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 FKBP5Q13451 457 aaPredicted RBP10.85□□□□□ -0.67
NUP54-210ENST00000510884 OCLNQ16625 522 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 C11orf91Q3C1V1 193 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 SLC6A14Q9UN76 642 aa10.85□□□□□ -0.67
NUP54-210ENST00000510884 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
NUP54-210ENST00000510884 ADAM23O75077 832 aa10.84□□□□□ -0.67
NUP54-210ENST00000510884 NID1P14543 1247 aa10.84□□□□□ -0.67
NUP54-210ENST00000510884 UBE2OQ9C0C9 1292 aaKnown RBP10.84□□□□□ -0.67
NUP54-210ENST00000510884 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP54-210ENST00000510884 ATG7O95352 703 aa10.83□□□□□ -0.68
NUP54-210ENST00000510884 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
NUP54-210ENST00000510884 STK32AQ8WU08 396 aa10.83□□□□□ -0.68
NUP54-210ENST00000510884 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
NUP54-210ENST00000510884 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.82□□□□□ -0.68
NUP54-210ENST00000510884 MICAL2O94851 1124 aa10.82□□□□□ -0.68
NUP54-210ENST00000510884 MAP3K6O95382 1288 aa10.82□□□□□ -0.68
NUP54-210ENST00000510884 NFKB1P19838 968 aa10.82□□□□□ -0.68
NUP54-210ENST00000510884 PNMA5Q96PV4 448 aa10.82□□□□□ -0.68
NUP54-210ENST00000510884 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
NUP54-210ENST00000510884 PRRT3Q5FWE3 981 aa10.81□□□□□ -0.68
NUP54-210ENST00000510884 PRIMPOLQ96LW4 560 aa10.81□□□□□ -0.68
NUP54-210ENST00000510884 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
NUP54-210ENST00000510884 TBC1D8BQ0IIM8 1120 aa10.8□□□□□ -0.68
NUP54-210ENST00000510884 COL26A1Q96A83 441 aa10.8□□□□□ -0.68
NUP54-210ENST00000510884 PRMT3O60678 531 aa10.79□□□□□ -0.68
NUP54-210ENST00000510884 LILRB5O75023 590 aa10.79□□□□□ -0.68
NUP54-210ENST00000510884 COX20Q5RI15 118 aa10.79□□□□□ -0.68
NUP54-210ENST00000510884 IFT43Q96FT9 208 aa10.79□□□□□ -0.68
NUP54-210ENST00000510884 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
NUP54-210ENST00000510884 OPLAHO14841 1288 aa10.78□□□□□ -0.68
NUP54-210ENST00000510884 CXXC1Q9P0U4 656 aaPredicted RBP10.78□□□□□ -0.68
NUP54-210ENST00000510884 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
NUP54-210ENST00000510884 PCSK7Q16549 785 aa10.77□□□□□ -0.69
NUP54-210ENST00000510884 PBXIP1Q96AQ6 731 aa10.77□□□□□ -0.69
NUP54-210ENST00000510884 IGFLR1Q9H665 355 aa10.77□□□□□ -0.69
NUP54-210ENST00000510884 EGFRP00533 1210 aa10.76□□□□□ -0.69
NUP54-210ENST00000510884 TMEM164Q5U3C3 297 aa10.76□□□□□ -0.69
NUP54-210ENST00000510884 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
NUP54-210ENST00000510884 TREML1Q86YW5 311 aa10.76□□□□□ -0.69
NUP54-210ENST00000510884 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
NUP54-210ENST00000510884 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
NUP54-210ENST00000510884 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
NUP54-210ENST00000510884 TRPM4Q8TD43 1214 aa10.75□□□□□ -0.69
NUP54-210ENST00000510884 CCDC97Q96F63 343 aaPredicted RBP10.75□□□□□ -0.69
NUP54-210ENST00000510884 SERPINA10Q9UK55 444 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms