RNA–Protein interactions for RNA: ENST00000510390.1

CXCL3-203, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 2

Gene CXCL3, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-203ENST00000510390 CHPF2Q9P2E5 772 aa25.4■■□□□ 1.66
CXCL3-203ENST00000510390 CALD1Q05682 793 aaKnown RBP25.39■■□□□ 1.66
CXCL3-203ENST00000510390 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
CXCL3-203ENST00000510390 LAMB2P55268 1798 aa25.39■■□□□ 1.65
CXCL3-203ENST00000510390 SNED1Q8TER0 1413 aa25.38■■□□□ 1.65
CXCL3-203ENST00000510390 HOXA10P31260 410 aaPredicted RBP25.38■■□□□ 1.65
CXCL3-203ENST00000510390 AIMP1Q12904 312 aaKnown RBP25.38■■□□□ 1.65
CXCL3-203ENST00000510390 HSP90AB3PQ58FF7 597 aa25.38■■□□□ 1.65
CXCL3-203ENST00000510390 RNF123Q5XPI4 1314 aa25.37■■□□□ 1.65
CXCL3-203ENST00000510390 FKBP4Q02790 459 aaKnown RBP eCLIP25.37■■□□□ 1.65
CXCL3-203ENST00000510390 DUSP27Q5VZP5 1158 aa25.37■■□□□ 1.65
CXCL3-203ENST00000510390 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
CXCL3-203ENST00000510390 GNAI1P63096 354 aa25.36■■□□□ 1.65
CXCL3-203ENST00000510390 DPY19L2Q6NUT2 758 aa25.36■■□□□ 1.65
CXCL3-203ENST00000510390 OLFM4Q6UX06 510 aa25.36■■□□□ 1.65
CXCL3-203ENST00000510390 RPGRQ92834 1020 aaKnown RBP25.36■■□□□ 1.65
CXCL3-203ENST00000510390 UTP14AQ9BVJ6 771 aaKnown RBP25.36■■□□□ 1.65
CXCL3-203ENST00000510390 RTKN2Q8IZC4 609 aa25.35■■□□□ 1.65
CXCL3-203ENST00000510390 VEGFAP15692 232 aaPredicted RBP25.34■■□□□ 1.65
CXCL3-203ENST00000510390 FSTL1Q12841 308 aa25.34■■□□□ 1.65
CXCL3-203ENST00000510390 TCIRG1Q13488 830 aa25.34■■□□□ 1.65
CXCL3-203ENST00000510390 SLC10A5Q5PT55 438 aa25.34■■□□□ 1.65
CXCL3-203ENST00000510390 NLRP10Q86W26 655 aa25.34■■□□□ 1.65
CXCL3-203ENST00000510390 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
CXCL3-203ENST00000510390 CRAMP1Q96RY5 1269 aa25.33■■□□□ 1.65
CXCL3-203ENST00000510390 POTECB2RU33 542 aa25.32■■□□□ 1.64
CXCL3-203ENST00000510390 APLP1P51693 650 aa25.32■■□□□ 1.64
CXCL3-203ENST00000510390 PLBD2Q8NHP8 589 aa25.32■■□□□ 1.64
CXCL3-203ENST00000510390 NLRP3Q96P20 1036 aa25.32■■□□□ 1.64
CXCL3-203ENST00000510390 HYPKQ9NX55 129 aa25.32■■□□□ 1.64
CXCL3-203ENST00000510390 CC2D2BQ6DHV5 1058 aa25.31■■□□□ 1.64
CXCL3-203ENST00000510390 RBM17Q96I25 401 aaKnown RBP25.31■■□□□ 1.64
CXCL3-203ENST00000510390 DDX60Q8IY21 1712 aaKnown RBP25.31■■□□□ 1.64
CXCL3-203ENST00000510390 ANP32CO43423 234 aa25.3■■□□□ 1.64
CXCL3-203ENST00000510390 ANKRD13DQ6ZTN6 518 aa25.3■■□□□ 1.64
CXCL3-203ENST00000510390 PSMD1Q99460 953 aa25.3■■□□□ 1.64
CXCL3-203ENST00000510390 ZNF277Q9NRM2 450 aaPredicted RBP25.3■■□□□ 1.64
CXCL3-203ENST00000510390 CCDC27Q2M243 656 aa25.29■■□□□ 1.64
CXCL3-203ENST00000510390 SMC1BQ8NDV3 1235 aa25.29■■□□□ 1.64
CXCL3-203ENST00000510390 SYNE4Q8N205 404 aa25.28■■□□□ 1.64
CXCL3-203ENST00000510390 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
CXCL3-203ENST00000510390 TRMT112Q9UI30 125 aaKnown RBP25.28■■□□□ 1.64
CXCL3-203ENST00000510390 SH3TC1Q8TE82 1336 aa25.28■■□□□ 1.64
CXCL3-203ENST00000510390 SCN4AP35499 1836 aa25.28■■□□□ 1.64
CXCL3-203ENST00000510390 PPEF1O14829 653 aaPredicted RBP25.27■■□□□ 1.64
CXCL3-203ENST00000510390 DDNO94850 711 aaPredicted RBP25.27■■□□□ 1.64
CXCL3-203ENST00000510390 IARSP41252 1262 aaKnown RBP25.27■■□□□ 1.64
CXCL3-203ENST00000510390 GRIPAP1Q4V328 841 aa25.27■■□□□ 1.64
CXCL3-203ENST00000510390 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
CXCL3-203ENST00000510390 C8orf58Q8NAV2 365 aa25.26■■□□□ 1.63
CXCL3-203ENST00000510390 ELL2O00472 640 aaPredicted RBP25.25■■□□□ 1.63
CXCL3-203ENST00000510390 NCBP3Q53F19 620 aaKnown RBP25.25■■□□□ 1.63
CXCL3-203ENST00000510390 ABCC4O15439 1325 aa25.25■■□□□ 1.63
CXCL3-203ENST00000510390 COL4A5P29400 1685 aa25.24■■□□□ 1.63
CXCL3-203ENST00000510390 HCLS1P14317 486 aaPredicted RBP25.24■■□□□ 1.63
CXCL3-203ENST00000510390 SLC51AQ86UW1 340 aa25.24■■□□□ 1.63
CXCL3-203ENST00000510390 WWC1Q8IX03 1113 aa25.24■■□□□ 1.63
CXCL3-203ENST00000510390 L3MBTL3Q96JM7 780 aaPredicted RBP25.24■■□□□ 1.63
CXCL3-203ENST00000510390 ZNF541Q9H0D2 1346 aa25.23■■□□□ 1.63
CXCL3-203ENST00000510390 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
CXCL3-203ENST00000510390 TAF1P21675 1872 aa25.23■■□□□ 1.63
CXCL3-203ENST00000510390 FZD9O00144 591 aa25.22■■□□□ 1.63
CXCL3-203ENST00000510390 CHMP4AQ9BY43 222 aa25.22■■□□□ 1.63
CXCL3-203ENST00000510390 ATP6V0A2Q9Y487 856 aa25.22■■□□□ 1.63
CXCL3-203ENST00000510390 LRRC37AA6NMS7 1700 aa25.21■■□□□ 1.63
CXCL3-203ENST00000510390 ATP5J2-PTCD1G3V325 749 aa25.21■■□□□ 1.63
CXCL3-203ENST00000510390 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
CXCL3-203ENST00000510390 TRIM28Q13263 835 aaKnown RBP25.21■■□□□ 1.63
CXCL3-203ENST00000510390 IL16Q14005 1332 aa25.2■■□□□ 1.62
CXCL3-203ENST00000510390 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.62
CXCL3-203ENST00000510390 CCDC30Q5VVM6 783 aa25.2■■□□□ 1.62
CXCL3-203ENST00000510390 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
CXCL3-203ENST00000510390 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
CXCL3-203ENST00000510390 TSR2Q969E8 191 aaKnown RBP25.2■■□□□ 1.62
CXCL3-203ENST00000510390 IQCA1LA6NCM1 817 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 BBOX1O75936 387 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 RIC3Q7Z5B4 369 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 JDP2Q8WYK2 163 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 ZNF428Q96B54 188 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 FAM89AQ96GI7 184 aa25.19■■□□□ 1.62
CXCL3-203ENST00000510390 DDX46Q7L014 1031 aaKnown RBP25.18■■□□□ 1.62
CXCL3-203ENST00000510390 TMX4Q9H1E5 349 aaPredicted RBP25.18■■□□□ 1.62
CXCL3-203ENST00000510390 GRAPQ13588 217 aa25.17■■□□□ 1.62
CXCL3-203ENST00000510390 GRAPLQ8TC17 118 aaPredicted RBP25.17■■□□□ 1.62
CXCL3-203ENST00000510390 ADAMTSL1Q8N6G6 1762 aa25.16■■□□□ 1.62
CXCL3-203ENST00000510390 SP8Q8IXZ3 490 aa25.16■■□□□ 1.62
CXCL3-203ENST00000510390 HTRA3P83110 453 aa25.15■■□□□ 1.62
CXCL3-203ENST00000510390 SF3B3Q15393 1217 aaKnown RBP25.15■■□□□ 1.62
CXCL3-203ENST00000510390 GPC2Q8N158 579 aa25.15■■□□□ 1.62
CXCL3-203ENST00000510390 LARGE2Q8N3Y3 721 aa25.15■■□□□ 1.62
CXCL3-203ENST00000510390 RTFDC1Q9BY42 306 aaPredicted RBP25.15■■□□□ 1.62
CXCL3-203ENST00000510390 VPS33BQ9H267 617 aa25.15■■□□□ 1.62
CXCL3-203ENST00000510390 TAF1DQ9H5J8 278 aaPredicted RBP25.15■■□□□ 1.62
CXCL3-203ENST00000510390 DDX58O95786 925 aaKnown RBP25.14■■□□□ 1.62
CXCL3-203ENST00000510390 POTEIP0CG38 1075 aa25.14■■□□□ 1.62
CXCL3-203ENST00000510390 POTEJP0CG39 1038 aa25.14■■□□□ 1.62
CXCL3-203ENST00000510390 MYD88Q99836 296 aa25.14■■□□□ 1.62
CXCL3-203ENST00000510390 DUOX1Q9NRD9 1551 aa25.14■■□□□ 1.61
CXCL3-203ENST00000510390 COL4A1P02462 1669 aa25.13■■□□□ 1.61
CXCL3-203ENST00000510390 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms