RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 EIF4BP23588 611 aaKnown RBP12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 INPP5BP32019 993 aa12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 PDE12Q6L8Q7 609 aaKnown RBP12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 NBPF10Q6P3W6 841 aaKnown RBP12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 AIDAQ96BJ3 306 aa12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 NLRP2Q9NX02 1062 aa12.4□□□□□ -0.42
SPOCK1-207ENST00000509978 TNFRSF21O75509 655 aa12.39□□□□□ -0.43
SPOCK1-207ENST00000509978 SMPD1P17405 629 aa12.39□□□□□ -0.43
SPOCK1-207ENST00000509978 IDH3AP50213 366 aa12.39□□□□□ -0.43
SPOCK1-207ENST00000509978 ARSDP51689 593 aa12.39□□□□□ -0.43
SPOCK1-207ENST00000509978 INSM2Q96T92 566 aaPredicted RBP12.39□□□□□ -0.43
SPOCK1-207ENST00000509978 A6NHS1 94 aa12.38□□□□□ -0.43
SPOCK1-207ENST00000509978 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
SPOCK1-207ENST00000509978 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.38□□□□□ -0.43
SPOCK1-207ENST00000509978 PTPN12Q05209 780 aaKnown RBP12.37□□□□□ -0.43
SPOCK1-207ENST00000509978 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.37□□□□□ -0.43
SPOCK1-207ENST00000509978 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
SPOCK1-207ENST00000509978 CCDC74AQ96AQ1 378 aa12.37□□□□□ -0.43
SPOCK1-207ENST00000509978 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 GMLQ99445 158 aa12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 C12orf49Q9H741 205 aa12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 ZFYVE28Q9HCC9 887 aa12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 C11orf16Q9NQ32 467 aa12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
SPOCK1-207ENST00000509978 ATP4AP20648 1035 aa12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 BTLAQ7Z6A9 289 aa12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
SPOCK1-207ENST00000509978 ZNF438Q7Z4V0 828 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 ZIC5Q96T25 663 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 DDX41Q9UJV9 622 aaKnown RBP12.34□□□□□ -0.43
SPOCK1-207ENST00000509978 UPP2O95045 317 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PHKA2P46019 1235 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PRR20EP86478 221 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PRR20CP86479 221 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PRR20DP86480 221 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PRR20BP86481 221 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 PRR20AP86496 221 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
SPOCK1-207ENST00000509978 UBAP1LF5GYI3 381 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 ST13P50502 369 aaKnown RBP12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 POU4F2Q12837 409 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 NEUROD4Q9HD90 331 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 FAM8A1Q9UBU6 413 aa12.32□□□□□ -0.44
SPOCK1-207ENST00000509978 A0A0G2JS52 829 aa12.31□□□□□ -0.44
SPOCK1-207ENST00000509978 HPS1Q92902 700 aa12.31□□□□□ -0.44
SPOCK1-207ENST00000509978 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
SPOCK1-207ENST00000509978 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
SPOCK1-207ENST00000509978 A0A1B0GTH6 734 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 POTECB2RU33 542 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 EGFRP00533 1210 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 EPB42P16452 691 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
SPOCK1-207ENST00000509978 PHACTR2O75167 634 aa12.29□□□□□ -0.44
SPOCK1-207ENST00000509978 TAF1CQ15572 869 aaPredicted RBP12.29□□□□□ -0.44
SPOCK1-207ENST00000509978 LYSMD3Q7Z3D4 306 aa12.29□□□□□ -0.44
SPOCK1-207ENST00000509978 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
SPOCK1-207ENST00000509978 CAPN5O15484 640 aaPredicted RBP12.28□□□□□ -0.44
SPOCK1-207ENST00000509978 RACK1P63244 317 aaKnown RBP12.28□□□□□ -0.44
SPOCK1-207ENST00000509978 GALNT12Q8IXK2 581 aa12.28□□□□□ -0.44
SPOCK1-207ENST00000509978 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
SPOCK1-207ENST00000509978 CUEDC1Q9NWM3 386 aaPredicted RBP12.28□□□□□ -0.44
SPOCK1-207ENST00000509978 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 MSX1P28360 303 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 IRS1P35568 1242 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 PI16Q6UXB8 463 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 PRICKLE2Q7Z3G6 844 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 USP48Q86UV5 1035 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
SPOCK1-207ENST00000509978 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
SPOCK1-207ENST00000509978 GRNP28799 593 aaKnown RBP12.26□□□□□ -0.45
SPOCK1-207ENST00000509978 TNNI2P48788 182 aa12.26□□□□□ -0.45
SPOCK1-207ENST00000509978 TYRO3Q06418 890 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms