RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-208	ENST00000509828	RBM17	Q96I25	401 aa	Known RBP	13.77	□□□□□ -0.21
MBD4-208	ENST00000509828	CAPNS2	Q96L46	248 aa		13.77	□□□□□ -0.21
MBD4-208	ENST00000509828	PSMD1	Q99460	953 aa		13.77	□□□□□ -0.21
MBD4-208	ENST00000509828	RSPH6A	Q9H0K4	717 aa		13.77	□□□□□ -0.21
MBD4-208	ENST00000509828	RRP7A	Q9Y3A4	280 aa	Known RBP	13.77	□□□□□ -0.21
MBD4-208	ENST00000509828	DCTN1	Q14203	1278 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	TAF7	Q15545	349 aa	Predicted RBP	13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	FAM161A	Q3B820	660 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	GRIPAP1	Q4V328	841 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	NIM1K	Q8IY84	436 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	GPR101	Q96P66	508 aa	Predicted RBP	13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	MIS18A	Q9NYP9	233 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	CACNA1S	Q13698	1873 aa		13.76	□□□□□ -0.21
MBD4-208	ENST00000509828	GPT	P24298	496 aa		13.75	□□□□□ -0.21
MBD4-208	ENST00000509828	EPS15	P42566	896 aa		13.75	□□□□□ -0.21
MBD4-208	ENST00000509828	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
MBD4-208	ENST00000509828	MLLT1	Q03111	559 aa	Predicted RBP	13.74	□□□□□ -0.21
MBD4-208	ENST00000509828	CYP4F22	Q6NT55	531 aa		13.74	□□□□□ -0.21
MBD4-208	ENST00000509828	USP50	Q70EL3	339 aa	Predicted RBP	13.74	□□□□□ -0.21
MBD4-208	ENST00000509828	ERVV-1	B6SEH8	477 aa		13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	PPEF1	O14829	653 aa	Predicted RBP	13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	PPIP5K2	O43314	1243 aa		13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	MYL6B	P14649	208 aa		13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	FMR1	Q06787	632 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	PNISR	Q8TF01	805 aa	Known RBP	13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	ZBTB3	Q9H5J0	574 aa		13.73	□□□□□ -0.21
MBD4-208	ENST00000509828	NPC1L1	Q9UHC9	1359 aa		13.72	□□□□□ -0.21
MBD4-208	ENST00000509828	TRAF5	O00463	557 aa		13.72	□□□□□ -0.21
MBD4-208	ENST00000509828	TSKS	Q9UJT2	592 aa		13.72	□□□□□ -0.21
MBD4-208	ENST00000509828	COL3A1	P02461	1466 aa	Predicted RBP	13.72	□□□□□ -0.21
MBD4-208	ENST00000509828	MAP3K15	Q6ZN16	1313 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	HOXA10	P31260	410 aa	Predicted RBP	13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	CRY2	Q49AN0	593 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	PPP1R42	Q7Z4L9	355 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	SUPT20H	Q8NEM7	779 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	NLRP3	Q96P20	1036 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	CRAMP1	Q96RY5	1269 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	BCL2L13	Q9BXK5	485 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	ZNF408	Q9H9D4	720 aa		13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	ADARB2	Q9NS39	739 aa	Known RBP	13.71	□□□□□ -0.21
MBD4-208	ENST00000509828	ARFGEF2	Q9Y6D5	1785 aa		13.71	□□□□□ -0.22
MBD4-208	ENST00000509828	AOC2	O75106	756 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	CELF2	O95319	508 aa	Known RBP	13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	MAP2K2	P36507	400 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	SCNN1D	P51172	638 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	SUSD4	Q5VX71	490 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	TLL2	Q9Y6L7	1015 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	BCOR	Q6W2J9	1755 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	ABCC12	Q96J65	1359 aa		13.7	□□□□□ -0.22
MBD4-208	ENST00000509828	SIPA1L3	O60292	1781 aa	Predicted RBP	13.69	□□□□□ -0.22
MBD4-208	ENST00000509828	AOC3	Q16853	763 aa		13.69	□□□□□ -0.22
MBD4-208	ENST00000509828	CST9	Q5W186	159 aa		13.69	□□□□□ -0.22
MBD4-208	ENST00000509828	TTLL7	Q6ZT98	887 aa		13.69	□□□□□ -0.22
MBD4-208	ENST00000509828	ZNRF3	Q9ULT6	936 aa		13.69	□□□□□ -0.22
MBD4-208	ENST00000509828	CA12	O43570	354 aa		13.68	□□□□□ -0.22
MBD4-208	ENST00000509828	PPP2R1A	P30153	589 aa		13.68	□□□□□ -0.22
MBD4-208	ENST00000509828	VPS33B	Q9H267	617 aa		13.68	□□□□□ -0.22
MBD4-208	ENST00000509828	GPRC5D	Q9NZD1	345 aa		13.68	□□□□□ -0.22
MBD4-208	ENST00000509828	SLC34A2	O95436	690 aa		13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	GMPS	P49915	693 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	TNIP1	Q15025	636 aa		13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	PARP10	Q53GL7	1025 aa		13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	DPP8	Q6V1X1	898 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	UTP14A	Q9BVJ6	771 aa	Known RBP	13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	ATP6V0A2	Q9Y487	856 aa		13.67	□□□□□ -0.22
MBD4-208	ENST00000509828	EIF4A1	P60842	406 aa	Known RBP	13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	CXCL9	Q07325	125 aa		13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	CIAPIN1	Q6FI81	312 aa		13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	ZNF34	Q8IZ26	560 aa		13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	MPND	Q8N594	471 aa		13.66	□□□□□ -0.22
MBD4-208	ENST00000509828	UBN2	Q6ZU65	1347 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828		H7C1D1	291 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	BBOX1	O75936	387 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	RAD17	O75943	681 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	EIF2S2	P20042	333 aa	Known RBP	13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	DGKZ	Q13574	1117 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	CDC37L1	Q7L3B6	337 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	SAPCD2	Q86UD0	394 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	ADAMTSL1	Q8N6G6	1762 aa		13.65	□□□□□ -0.22
MBD4-208	ENST00000509828	MAPK8IP3	Q9UPT6	1336 aa		13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	NTSR2	O95665	410 aa		13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	C3orf67	Q6ZVT6	689 aa		13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	DDX46	Q7L014	1031 aa	Known RBP	13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	MCOLN1	Q9GZU1	580 aa		13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	PNN	Q9H307	717 aa	Known RBP	13.64	□□□□□ -0.23
MBD4-208	ENST00000509828	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	BRPF1	P55201	1214 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	USP48	Q86UV5	1035 aa		13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	SLC51A	Q86UW1	340 aa		13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	SP8	Q8IXZ3	490 aa		13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	ZC3H15	Q8WU90	426 aa	Known RBP	13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	THUMPD2	Q9BTF0	503 aa	Known RBP	13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	CNOT7	Q9UIV1	285 aa	Known RBP	13.63	□□□□□ -0.23
MBD4-208	ENST00000509828	RGS19	P49795	217 aa		13.62	□□□□□ -0.23
MBD4-208	ENST00000509828	HUNK	P57058	714 aa		13.62	□□□□□ -0.23
MBD4-208	ENST00000509828	AIMP1	Q12904	312 aa	Known RBP	13.62	□□□□□ -0.23
MBD4-208	ENST00000509828	HHIPL1	Q96JK4	782 aa		13.62	□□□□□ -0.23
MBD4-208	ENST00000509828	TSPYL4	Q9UJ04	414 aa		13.62	□□□□□ -0.23

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