RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 CAPNS2Q96L46 248 aa13.69□□□□□ -0.22
COPS4-207ENST00000509317 AOC2O75106 756 aa13.68□□□□□ -0.22
COPS4-207ENST00000509317 GTF2E1P29083 439 aaPredicted RBP13.68□□□□□ -0.22
COPS4-207ENST00000509317 SCNN1DP51172 638 aa13.68□□□□□ -0.22
COPS4-207ENST00000509317 GPTP24298 496 aa13.67□□□□□ -0.22
COPS4-207ENST00000509317 MAP2K1Q02750 393 aaPredicted RBP13.67□□□□□ -0.22
COPS4-207ENST00000509317 CST9Q5W186 159 aa13.67□□□□□ -0.22
COPS4-207ENST00000509317 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
COPS4-207ENST00000509317 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
COPS4-207ENST00000509317 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
COPS4-207ENST00000509317 EIF6P56537 245 aaKnown RBP13.66□□□□□ -0.22
COPS4-207ENST00000509317 TTLL7Q6ZT98 887 aa13.66□□□□□ -0.22
COPS4-207ENST00000509317 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
COPS4-207ENST00000509317 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
COPS4-207ENST00000509317 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
COPS4-207ENST00000509317 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
COPS4-207ENST00000509317 PSMD1Q99460 953 aa13.65□□□□□ -0.22
COPS4-207ENST00000509317 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
COPS4-207ENST00000509317 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
COPS4-207ENST00000509317 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
COPS4-207ENST00000509317 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
COPS4-207ENST00000509317 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
COPS4-207ENST00000509317 AOC3Q16853 763 aa13.63□□□□□ -0.23
COPS4-207ENST00000509317 SUSD4Q5VX71 490 aa13.63□□□□□ -0.23
COPS4-207ENST00000509317 RPGRQ92834 1020 aaKnown RBP13.63□□□□□ -0.23
COPS4-207ENST00000509317 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
COPS4-207ENST00000509317 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
COPS4-207ENST00000509317 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
COPS4-207ENST00000509317 PPEF1O14829 653 aaPredicted RBP13.62□□□□□ -0.23
COPS4-207ENST00000509317 MYL6BP14649 208 aa13.62□□□□□ -0.23
COPS4-207ENST00000509317 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
COPS4-207ENST00000509317 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
COPS4-207ENST00000509317 BEGAINQ9BUH8 593 aa13.62□□□□□ -0.23
COPS4-207ENST00000509317 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
COPS4-207ENST00000509317 TLL2Q9Y6L7 1015 aa13.62□□□□□ -0.23
COPS4-207ENST00000509317 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
COPS4-207ENST00000509317 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
COPS4-207ENST00000509317 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
COPS4-207ENST00000509317 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
COPS4-207ENST00000509317 ECE1P42892 770 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
COPS4-207ENST00000509317 USP50Q70EL3 339 aaPredicted RBP13.6□□□□□ -0.23
COPS4-207ENST00000509317 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 CFAP53Q96M91 514 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 MCOLN1Q9GZU1 580 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
COPS4-207ENST00000509317 NTSR2O95665 410 aa13.59□□□□□ -0.23
COPS4-207ENST00000509317 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
COPS4-207ENST00000509317 CXCL9Q07325 125 aa13.59□□□□□ -0.23
COPS4-207ENST00000509317 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
COPS4-207ENST00000509317 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
COPS4-207ENST00000509317 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
COPS4-207ENST00000509317 ERVV-1B6SEH8 477 aa13.58□□□□□ -0.24
COPS4-207ENST00000509317 RGL2O15211 777 aa13.58□□□□□ -0.24
COPS4-207ENST00000509317 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
COPS4-207ENST00000509317 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
COPS4-207ENST00000509317 KIF6Q6ZMV9 814 aa13.58□□□□□ -0.24
COPS4-207ENST00000509317 TRPM4Q8TD43 1214 aa13.58□□□□□ -0.24
COPS4-207ENST00000509317 TNRC18O15417 2968 aaPredicted RBP13.58□□□□□ -0.24
COPS4-207ENST00000509317 RIC1Q4ADV7 1423 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 RAD17O75943 681 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 RGS19P49795 217 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
COPS4-207ENST00000509317 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 ADARB2Q9NS39 739 aaKnown RBP13.57□□□□□ -0.24
COPS4-207ENST00000509317 NUDCQ9Y266 331 aa13.57□□□□□ -0.24
COPS4-207ENST00000509317 ANXA1P04083 346 aa13.56□□□□□ -0.24
COPS4-207ENST00000509317 ATP6V0A2Q9Y487 856 aa13.56□□□□□ -0.24
COPS4-207ENST00000509317 ABCC4O15439 1325 aa13.56□□□□□ -0.24
COPS4-207ENST00000509317 MAP2K2P36507 400 aa13.55□□□□□ -0.24
COPS4-207ENST00000509317 DGKZQ13574 1117 aa13.55□□□□□ -0.24
COPS4-207ENST00000509317 ZNRF3Q9ULT6 936 aa13.55□□□□□ -0.24
COPS4-207ENST00000509317 LAMB4A4D0S4 1761 aa13.54□□□□□ -0.24
COPS4-207ENST00000509317 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
COPS4-207ENST00000509317 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
COPS4-207ENST00000509317 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
COPS4-207ENST00000509317 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
COPS4-207ENST00000509317 NUP98P52948 1817 aa13.53□□□□□ -0.24
COPS4-207ENST00000509317 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
COPS4-207ENST00000509317 DPP8Q6V1X1 898 aaPredicted RBP13.53□□□□□ -0.24
COPS4-207ENST00000509317 GIGYF2Q6Y7W6 1299 aaKnown RBP13.53□□□□□ -0.24
COPS4-207ENST00000509317 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
COPS4-207ENST00000509317 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
COPS4-207ENST00000509317 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
COPS4-207ENST00000509317 IBTKQ9P2D0 1353 aaPredicted RBP13.53□□□□□ -0.24
COPS4-207ENST00000509317 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
COPS4-207ENST00000509317 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.24
COPS4-207ENST00000509317 EGFRP00533 1210 aa13.52□□□□□ -0.25
COPS4-207ENST00000509317 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
COPS4-207ENST00000509317 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms