RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 FXR1P51114 621 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNF4-211ENST00000509206 ST5P78524 1137 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 PKN2Q16513 984 aaKnown RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 CST9Q5W186 159 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 PRPF40BQ6NWY9 871 aaKnown RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 C3orf67Q6ZVT6 689 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 USP50Q70EL3 339 aaPredicted RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNF4-211ENST00000509206 SAPCD2Q86UD0 394 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 RTKN2Q8IZC4 609 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 CCDC24Q8N4L8 307 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 PDCD7Q8N8D1 485 aaKnown RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 MASTLQ96GX5 879 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 LARP6Q9BRS8 491 aaKnown RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 GGNBP2Q9H3C7 697 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 HPS5Q9UPZ3 1129 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 WASHC2AQ641Q2 1341 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 ROCK2O75116 1388 aaKnown RBP5.37□□□□□ -1.55
RNF4-211ENST00000509206 TIAM2Q8IVF5 1701 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 CCDC88AQ3V6T2 1871 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 A0A087WZG4 1122 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 ST20-MTHFSA0A0A6YYL1 179 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 MTHFSP49914 203 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 HUNKP57058 714 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 FKBP4Q02790 459 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNF4-211ENST00000509206 PLEKHO1Q53GL0 409 aaPredicted RBP5.36□□□□□ -1.55
RNF4-211ENST00000509206 STYK1Q6J9G0 422 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 SYNE4Q8N205 404 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 A0A1W2PP64 1363 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 INSRP06213 1382 aa5.36□□□□□ -1.55
RNF4-211ENST00000509206 ITGB4P16144 1822 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 SCN4AP35499 1836 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 FLT4P35916 1363 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 KDRP35968 1356 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 RAB3GAP2Q9H2M9 1393 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 FZD9O00144 591 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 CANXP27824 592 aaKnown RBP5.35□□□□□ -1.55
RNF4-211ENST00000509206 IARSP41252 1262 aaKnown RBP5.35□□□□□ -1.55
RNF4-211ENST00000509206 EPS15P42566 896 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 MFSD10Q14728 455 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 C1orf141Q5JVX7 400 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 INTS5Q6P9B9 1019 aaKnown RBP5.35□□□□□ -1.55
RNF4-211ENST00000509206 DNAJC10Q8IXB1 793 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 CNBD1Q8NA66 436 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 NFATC2IPQ8NCF5 419 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 CCDC102AQ96A19 550 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 SETDB2Q96T68 719 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 RNF186Q9NXI6 227 aa5.35□□□□□ -1.55
RNF4-211ENST00000509206 ZNF330Q9Y3S2 320 aaPredicted RBP5.35□□□□□ -1.55
RNF4-211ENST00000509206 RGPD2P0DJD1 1756 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 SOS1Q07889 1333 aaPredicted RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 ZNF157P51786 506 aaPredicted RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 KIF23Q02241 960 aaPredicted RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 PRR5LQ6MZQ0 368 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 RGMBQ6NW40 437 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 ZNF530Q6P9A1 599 aaPredicted RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 CDC37L1Q7L3B6 337 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 C2orf69Q8N8R5 385 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 OTUD5Q96G74 571 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 DDX27Q96GQ7 796 aaKnown RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 ZIC5Q96T25 663 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 EYA1Q99502 592 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 GLIS2Q9BZE0 524 aaPredicted RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 CRISPLD2Q9H0B8 497 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 ADARB2Q9NS39 739 aaKnown RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 BOLA1Q9Y3E2 137 aa5.34□□□□□ -1.55
RNF4-211ENST00000509206 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.55
RNF4-211ENST00000509206 COL15A1P39059 1388 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 CARMIL3Q8ND23 1372 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 SEMA3EO15041 775 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 FYB1O15117 783 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 SRGNP10124 158 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 ALDH1B1P30837 517 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 AMOTQ4VCS5 1084 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 TBC1D9BQ66K14 1250 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 LARGE2Q8N3Y3 721 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 SLAIN1Q8ND83 568 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 PUS7Q96PZ0 661 aaKnown RBP5.33□□□□□ -1.56
RNF4-211ENST00000509206 BCL2L13Q9BXK5 485 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 CARD11Q9BXL7 1154 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 TMX4Q9H1E5 349 aaPredicted RBP5.33□□□□□ -1.56
RNF4-211ENST00000509206 MON2Q7Z3U7 1717 aa5.33□□□□□ -1.56
RNF4-211ENST00000509206 KIF24Q5T7B8 1368 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 TESPA1A2RU30 521 aaPredicted RBP5.32□□□□□ -1.56
RNF4-211ENST00000509206 STARD3NLO95772 234 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 NPR1P16066 1061 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 GTF2E1P29083 439 aaPredicted RBP5.32□□□□□ -1.56
RNF4-211ENST00000509206 FBXO46Q6PJ61 603 aaPredicted RBP5.32□□□□□ -1.56
RNF4-211ENST00000509206 USP48Q86UV5 1035 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 NBPF5PQ86XG9 351 aaPredicted RBP5.32□□□□□ -1.56
RNF4-211ENST00000509206 NIM1KQ8IY84 436 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 L3MBTL2Q969R5 705 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 BCL2L12Q9HB09 334 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 TBC1D2BQ9UPU7 963 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 ZBTB1Q9Y2K1 713 aa5.32□□□□□ -1.56
RNF4-211ENST00000509206 EMILIN1Q9Y6C2 1016 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms