RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 PHLPP2Q6ZVD8 1323 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 GSDMDP57764 484 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 TRPM2O94759 1503 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 KCNJ6P48051 423 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 NSD2O96028 1365 aa11.74□□□□□ -0.53
PDGFRA-207ENST00000509092 GOLGA6L19H0YKK7 550 aa11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 VAMP4O75379 141 aa11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 RPAP2Q8IXW5 612 aaPredicted RBP11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 PDRG1Q9NUG6 133 aa11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 COL3A1P02461 1466 aaPredicted RBP11.73□□□□□ -0.53
PDGFRA-207ENST00000509092 GOLIM4O00461 696 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 KIF3BO15066 747 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 EPB41L2O43491 1005 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 TTC41PQ6P2S7 1318 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 H3BQF6 201 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 TTC6Q86TZ1 520 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 MSH6P52701 1360 aa11.72□□□□□ -0.53
PDGFRA-207ENST00000509092 PPP1R12AO14974 1030 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-207ENST00000509092 PDE1AP54750 535 aa11.71□□□□□ -0.53
PDGFRA-207ENST00000509092 KRT85P78386 507 aa11.71□□□□□ -0.53
PDGFRA-207ENST00000509092 IQCB1Q15051 598 aa11.71□□□□□ -0.53
PDGFRA-207ENST00000509092 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
PDGFRA-207ENST00000509092 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 EVCP57679 992 aa11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 DNAI1Q9UI46 699 aa11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 DEPDC5O75140 1603 aa11.71□□□□□ -0.54
PDGFRA-207ENST00000509092 ETF1P62495 437 aaKnown RBP11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 MAP2K1Q02750 393 aaPredicted RBP11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 TTC14Q96N46 770 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 LIMCH1Q9UPQ0 1083 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
PDGFRA-207ENST00000509092 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 MAP2K7O14733 419 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 CCP110O43303 1012 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 SMC2O95347 1197 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 CHMLP26374 656 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 CALRP27797 417 aaKnown RBP11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 HSPA4P34932 840 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 USP8P40818 1118 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 SGSM3Q96HU1 749 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 VPS18Q9P253 973 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 APBB1O00213 710 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 GJB2P29033 226 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 JAKMIP3Q5VZ66 844 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 NPHP3Q7Z494 1330 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
PDGFRA-207ENST00000509092 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 KIF3CO14782 793 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 GNAI3P08754 354 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 DHX8Q14562 1220 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 RUFY3Q7L099 469 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 AK2P54819 239 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 LRRC31Q6UY01 552 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 HOMER1Q86YM7 354 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
PDGFRA-207ENST00000509092 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 NRDCO43847 1150 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 URI1O94763 535 aaPredicted RBP11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 MNAT1P51948 309 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 APOBRQ0VD83 1088 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 LONRF2Q1L5Z9 754 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 MICALL1Q8N3F8 863 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms