RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 KIAA1024Q9UPX6 916 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 IVNS1ABPQ9Y6Y0 642 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 APBA3O96018 575 aa6.57□□□□□ -1.36
COL4A3BP-205ENST00000508692 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
COL4A3BP-205ENST00000508692 SCNN1DP51172 638 aa6.56□□□□□ -1.36
COL4A3BP-205ENST00000508692 TXNDC2Q86VQ3 553 aa6.56□□□□□ -1.36
COL4A3BP-205ENST00000508692 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
COL4A3BP-205ENST00000508692 NIFKQ9BYG3 293 aaKnown RBP6.56□□□□□ -1.36
COL4A3BP-205ENST00000508692 ELOA3CA0A087WX78 387 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 ELOA3DA6NLF2 546 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 SFI1A8K8P3 1242 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 FAM157BP0CG42 384 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 COL9A3Q14050 684 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 ELOA3BQ3SY89 546 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 PHLDB3Q6NSJ2 640 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 ELOA3Q8NG57 546 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 MDFIQ99750 246 aa6.55□□□□□ -1.36
COL4A3BP-205ENST00000508692 BTBD11A6QL63 1104 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 INHAP05111 366 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 MFAP1P55081 439 aaKnown RBP6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 GDF10P55107 478 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 ZNF295-AS1Q8N0V1 137 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 GAS2L2Q8NHY3 880 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 ZIC5Q96T25 663 aa6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 CXXC1Q9P0U4 656 aaPredicted RBP6.54□□□□□ -1.36
COL4A3BP-205ENST00000508692 M0R082 166 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 EFSO43281 561 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 PRMT3O60678 531 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 GRIK4Q16099 956 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 NBPF1Q3BBV0 1214 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 SYT9Q86SS6 491 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 ZNF417Q8TAU3 575 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 ZNF587Q96SQ5 575 aaPredicted RBP6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 MARK1Q9P0L2 795 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 USP3Q9Y6I4 520 aa6.53□□□□□ -1.36
COL4A3BP-205ENST00000508692 TATP17735 454 aaPredicted RBP6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 ALAS2P22557 587 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 WEE1P30291 646 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 SMTNP53814 917 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 LRP8Q14114 963 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 OCLNQ16625 522 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 TSEN2Q8NCE0 465 aaKnown RBP6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 PRIMPOLQ96LW4 560 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 ZNF358Q9NW07 568 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 STARD13Q9Y3M8 1113 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
COL4A3BP-205ENST00000508692 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 IGFBP4P22692 258 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 SAMD5Q5TGI4 173 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 COL26A1Q96A83 441 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 SLC4A9Q96Q91 983 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 SERTAD1Q9UHV2 236 aa6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 IQSEC3Q9UPP2 1182 aaPredicted RBP6.51□□□□□ -1.37
COL4A3BP-205ENST00000508692 HYAL3O43820 417 aaPredicted RBP6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 ALBP02768 609 aa6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 TRIM28Q13263 835 aaKnown RBP6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 ZDHHC3Q9NYG2 299 aa6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 EGFL7Q9UHF1 273 aa6.5□□□□□ -1.37
COL4A3BP-205ENST00000508692 ADARB2-AS1A8MUL3 147 aa6.49□□□□□ -1.37
COL4A3BP-205ENST00000508692 FOXO3O43524 673 aa6.49□□□□□ -1.37
COL4A3BP-205ENST00000508692 LAMC2Q13753 1193 aa6.49□□□□□ -1.37
COL4A3BP-205ENST00000508692 GOLGA2P5Q9HBQ8 144 aa6.49□□□□□ -1.37
COL4A3BP-205ENST00000508692 PARP3Q9Y6F1 533 aa6.49□□□□□ -1.37
COL4A3BP-205ENST00000508692 SIN3BO75182 1162 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 H2AFB1P0C5Y9 115 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 H2AFB2P0C5Z0 115 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 NID1P14543 1247 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 TXLNAP40222 546 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 MICALL1Q8N3F8 863 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 VTI1AQ96AJ9 217 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 PRDM6Q9NQX0 595 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 CABP1Q9NZU7 370 aa6.48□□□□□ -1.37
COL4A3BP-205ENST00000508692 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 SOWAHDA6NJG2 315 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 A6NJY4 79 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 ERCC3P19447 782 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 MTFR1Q15390 333 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 TNS4Q8IZW8 715 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 SCG3Q8WXD2 468 aaKnown RBP6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 SLC30A3Q99726 388 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
COL4A3BP-205ENST00000508692 CDK2AP1O14519 115 aa6.46□□□□□ -1.38
COL4A3BP-205ENST00000508692 SELPP16109 830 aa6.46□□□□□ -1.38
COL4A3BP-205ENST00000508692 RANGAP1P46060 587 aaPredicted RBP6.46□□□□□ -1.38
COL4A3BP-205ENST00000508692 SERPINB4P48594 390 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms