RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 ARHGEF1Q92888 912 aaKnown RBP18.02■□□□□ 0.48
HMGCLL1-208ENST00000508459 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
HMGCLL1-208ENST00000508459 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
HMGCLL1-208ENST00000508459 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
HMGCLL1-208ENST00000508459 ZNF34Q8IZ26 560 aa18.01■□□□□ 0.47
HMGCLL1-208ENST00000508459 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
HMGCLL1-208ENST00000508459 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
HMGCLL1-208ENST00000508459 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
HMGCLL1-208ENST00000508459 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
HMGCLL1-208ENST00000508459 SLC16A10Q8TF71 515 aa18■□□□□ 0.47
HMGCLL1-208ENST00000508459 UTP14AQ9BVJ6 771 aaKnown RBP18■□□□□ 0.47
HMGCLL1-208ENST00000508459 NIP7Q9Y221 180 aaKnown RBP eCLIP18■□□□□ 0.47
HMGCLL1-208ENST00000508459 KCNQ4P56696 695 aa17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 HSP90AB4PQ58FF6 505 aa17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 TPTE2Q6XPS3 522 aa17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 ZBTB47Q9UFB7 747 aaPredicted RBP17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
HMGCLL1-208ENST00000508459 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 H7C1W4 665 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 PHF14O94880 888 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 GCC1Q96CN9 775 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 MEIS3Q99687 375 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
HMGCLL1-208ENST00000508459 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 NPHP1O15259 732 aa17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 MTX1Q13505 466 aa17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
HMGCLL1-208ENST00000508459 HLFQ16534 295 aa17.96■□□□□ 0.47
HMGCLL1-208ENST00000508459 UPF1Q92900 1129 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGCLL1-208ENST00000508459 PLA2G12BQ9BX93 195 aa17.96■□□□□ 0.47
HMGCLL1-208ENST00000508459 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
HMGCLL1-208ENST00000508459 UBE3BQ7Z3V4 1068 aa17.95■□□□□ 0.46
HMGCLL1-208ENST00000508459 ATP8B2P98198 1209 aa17.94■□□□□ 0.46
HMGCLL1-208ENST00000508459 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
HMGCLL1-208ENST00000508459 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
HMGCLL1-208ENST00000508459 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
HMGCLL1-208ENST00000508459 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 PDE8AO60658 829 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 NBPF7P0C2Y1 421 aaPredicted RBP17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 GPTP24298 496 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 ST5P78524 1137 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 CEP85Q6P2H3 762 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 ERC1Q8IUD2 1116 aa17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 LRRFIP2Q9Y608 721 aaKnown RBP17.93■□□□□ 0.46
HMGCLL1-208ENST00000508459 GYS1P13807 737 aa17.92■□□□□ 0.46
HMGCLL1-208ENST00000508459 ZNF827Q17R98 1081 aa17.92■□□□□ 0.46
HMGCLL1-208ENST00000508459 RABL6Q3YEC7 729 aaPredicted RBP17.92■□□□□ 0.46
HMGCLL1-208ENST00000508459 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
HMGCLL1-208ENST00000508459 IRS4O14654 1257 aaPredicted RBP17.91■□□□□ 0.46
HMGCLL1-208ENST00000508459 CCDC152Q4G0S7 254 aa17.91■□□□□ 0.46
HMGCLL1-208ENST00000508459 DEFB132Q7Z7B7 95 aa17.91■□□□□ 0.46
HMGCLL1-208ENST00000508459 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
HMGCLL1-208ENST00000508459 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
HMGCLL1-208ENST00000508459 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 SLC10A5Q5PT55 438 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 POTEHQ6S545 545 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 SSH3Q8TE77 659 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 MYH3P11055 1940 aa17.9■□□□□ 0.46
HMGCLL1-208ENST00000508459 LAMB2P55268 1798 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 NTSR2O95665 410 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 CASP7P55210 303 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 PCDHB15Q9Y5E8 787 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
HMGCLL1-208ENST00000508459 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 TM4SF1P30408 202 aa17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 CTSWP56202 376 aa17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 BICC1Q9H694 974 aaKnown RBP17.88■□□□□ 0.45
HMGCLL1-208ENST00000508459 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
HMGCLL1-208ENST00000508459 NFIXQ14938 502 aa17.87■□□□□ 0.45
HMGCLL1-208ENST00000508459 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
HMGCLL1-208ENST00000508459 CDC5LQ99459 802 aaKnown RBP17.87■□□□□ 0.45
HMGCLL1-208ENST00000508459 CSF1RP07333 972 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 POLA2Q14181 598 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 TAF7LQ5H9L4 462 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 BICDL1Q6ZP65 573 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
HMGCLL1-208ENST00000508459 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
HMGCLL1-208ENST00000508459 SERPINB2P05120 415 aa17.85■□□□□ 0.45
HMGCLL1-208ENST00000508459 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms