RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 STAG2Q8N3U4 1231 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 SCO2A0A1W2PP80 73 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 PRSS36Q5K4E3 855 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 BTLAQ7Z6A9 289 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 SLC6A14Q9UN76 642 aa10.16□□□□□ -0.78
TRAPPC13-209ENST00000508304 ELNP15502 786 aa10.15□□□□□ -0.78
TRAPPC13-209ENST00000508304 MBTPS1Q14703 1052 aa10.15□□□□□ -0.78
TRAPPC13-209ENST00000508304 C2orf49Q9BVC5 232 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-209ENST00000508304 UBE2OQ9C0C9 1292 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-209ENST00000508304 EFCC1Q9HA90 598 aa10.15□□□□□ -0.78
TRAPPC13-209ENST00000508304 ARTNQ5T4W7 220 aa10.14□□□□□ -0.79
TRAPPC13-209ENST00000508304 H2AFB1P0C5Y9 115 aa10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 H2AFB2P0C5Z0 115 aa10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 HIF1AQ16665 826 aa10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 ILDR2Q71H61 639 aa10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 LENG1Q96BZ8 264 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
TRAPPC13-209ENST00000508304 TBC1D8BQ0IIM8 1120 aa10.12□□□□□ -0.79
TRAPPC13-209ENST00000508304 TXNRD3Q86VQ6 643 aa10.12□□□□□ -0.79
TRAPPC13-209ENST00000508304 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
TRAPPC13-209ENST00000508304 ZFP64Q9NPA5 681 aa10.12□□□□□ -0.79
TRAPPC13-209ENST00000508304 KRTAP9-6A0A140TA67 174 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 AFF1P51825 1210 aaKnown RBP10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 RAC1P63000 192 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 IER5Q5VY09 327 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 NUDT8Q8WV74 236 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 GSX2Q9BZM3 304 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 IGFLR1Q9H665 355 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 DNAJB12Q9NXW2 375 aaKnown RBP10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 NAGPAQ9UK23 515 aa10.11□□□□□ -0.79
TRAPPC13-209ENST00000508304 UBTFP17480 764 aaKnown RBP10.1□□□□□ -0.79
TRAPPC13-209ENST00000508304 NRG1Q02297 640 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC13-209ENST00000508304 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
TRAPPC13-209ENST00000508304 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
TRAPPC13-209ENST00000508304 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
TRAPPC13-209ENST00000508304 FLIIQ13045 1269 aa10.09□□□□□ -0.79
TRAPPC13-209ENST00000508304 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
TRAPPC13-209ENST00000508304 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13-209ENST00000508304 FMR1NBQ8N0W7 255 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC13-209ENST00000508304 NGLY1Q96IV0 654 aa10.08□□□□□ -0.8
TRAPPC13-209ENST00000508304 DMGDHQ9UI17 866 aaKnown RBP10.08□□□□□ -0.8
TRAPPC13-209ENST00000508304 TGFBR3LH3BV60 316 aa10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 SEC13P55735 322 aa10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 CCINQ13939 588 aa10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 RTN1Q16799 776 aa10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
TRAPPC13-209ENST00000508304 NFKB1P19838 968 aa10.06□□□□□ -0.8
TRAPPC13-209ENST00000508304 RASA1P20936 1047 aa10.06□□□□□ -0.8
TRAPPC13-209ENST00000508304 GRNP28799 593 aaKnown RBP10.06□□□□□ -0.8
TRAPPC13-209ENST00000508304 PNMA5Q96PV4 448 aa10.06□□□□□ -0.8
TRAPPC13-209ENST00000508304 RGS9O75916 674 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC13-209ENST00000508304 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC13-209ENST00000508304 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
TRAPPC13-209ENST00000508304 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC13-209ENST00000508304 LRP8Q14114 963 aa10.03□□□□□ -0.8
TRAPPC13-209ENST00000508304 GRIK5Q16478 980 aa10.03□□□□□ -0.8
TRAPPC13-209ENST00000508304 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
TRAPPC13-209ENST00000508304 USP21Q9UK80 565 aa10.03□□□□□ -0.8
TRAPPC13-209ENST00000508304 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 MSL1Q68DK7 614 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 FAM35AQ86V20 835 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 DTWD1Q8N5C7 304 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 FRRS1LQ9P0K9 344 aa10.02□□□□□ -0.81
TRAPPC13-209ENST00000508304 EPB42P16452 691 aa10.01□□□□□ -0.81
TRAPPC13-209ENST00000508304 IGFBP4P22692 258 aa10.01□□□□□ -0.81
TRAPPC13-209ENST00000508304 INPP5BP32019 993 aa10.01□□□□□ -0.81
TRAPPC13-209ENST00000508304 PCSK7Q16549 785 aa10.01□□□□□ -0.81
TRAPPC13-209ENST00000508304 NBPF11Q86T75 865 aa10.01□□□□□ -0.81
TRAPPC13-209ENST00000508304 FBXO11Q86XK2 927 aa10□□□□□ -0.81
TRAPPC13-209ENST00000508304 GLMNQ92990 594 aa10□□□□□ -0.81
TRAPPC13-209ENST00000508304 ZBTB42B2RXF5 422 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 CPB1P15086 417 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 PTK7Q13308 1070 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 PERM1Q5SV97 790 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 TRPM4Q8TD43 1214 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 HINFPQ9BQA5 517 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 ZFATQ9P243 1243 aa9.99□□□□□ -0.81
TRAPPC13-209ENST00000508304 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 IDH3AP50213 366 aa9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 DHX32Q7L7V1 743 aaKnown RBP9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 FNBP4Q8N3X1 1017 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 C11orf16Q9NQ32 467 aa9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
TRAPPC13-209ENST00000508304 LGR5O75473 907 aa9.97□□□□□ -0.81
TRAPPC13-209ENST00000508304 PLAURQ03405 335 aa9.97□□□□□ -0.81
TRAPPC13-209ENST00000508304 DPYDQ12882 1025 aa9.97□□□□□ -0.81
TRAPPC13-209ENST00000508304 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC13-209ENST00000508304 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
TRAPPC13-209ENST00000508304 TTC9Q92623 222 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms