RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
DDX41-209ENST00000508279 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
DDX41-209ENST00000508279 TCIRG1Q13488 830 aa12.1□□□□□ -0.47
DDX41-209ENST00000508279 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
DDX41-209ENST00000508279 PLBD2Q8NHP8 589 aa12.1□□□□□ -0.47
DDX41-209ENST00000508279 TRMT112Q9UI30 125 aaKnown RBP12.1□□□□□ -0.47
DDX41-209ENST00000508279 FER1L6Q2WGJ9 1857 aa12.1□□□□□ -0.47
DDX41-209ENST00000508279 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
DDX41-209ENST00000508279 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 STK31Q9BXU1 1019 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 LAMB2P55268 1798 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 IL16Q14005 1332 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
DDX41-209ENST00000508279 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
DDX41-209ENST00000508279 NFKBIEO00221 500 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
DDX41-209ENST00000508279 LMNB1P20700 586 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 ALDH1B1P30837 517 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 OLFM4Q6UX06 510 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 TAF1P21675 1872 aa12.08□□□□□ -0.48
DDX41-209ENST00000508279 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
DDX41-209ENST00000508279 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
DDX41-209ENST00000508279 PRELPP51888 382 aa12.07□□□□□ -0.48
DDX41-209ENST00000508279 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
DDX41-209ENST00000508279 C3orf67Q6ZVT6 689 aa12.07□□□□□ -0.48
DDX41-209ENST00000508279 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
DDX41-209ENST00000508279 MYD88Q99836 296 aa12.07□□□□□ -0.48
DDX41-209ENST00000508279 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
DDX41-209ENST00000508279 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
DDX41-209ENST00000508279 DDX58O95786 925 aaKnown RBP12.06□□□□□ -0.48
DDX41-209ENST00000508279 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
DDX41-209ENST00000508279 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
DDX41-209ENST00000508279 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
DDX41-209ENST00000508279 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
DDX41-209ENST00000508279 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
DDX41-209ENST00000508279 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
DDX41-209ENST00000508279 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
DDX41-209ENST00000508279 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
DDX41-209ENST00000508279 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
DDX41-209ENST00000508279 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
DDX41-209ENST00000508279 NMRK2Q9NPI5 230 aa12.05□□□□□ -0.48
DDX41-209ENST00000508279 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
DDX41-209ENST00000508279 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
DDX41-209ENST00000508279 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
DDX41-209ENST00000508279 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
DDX41-209ENST00000508279 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
DDX41-209ENST00000508279 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
DDX41-209ENST00000508279 G2E3Q7L622 706 aa12.04□□□□□ -0.48
DDX41-209ENST00000508279 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
DDX41-209ENST00000508279 ZNF277Q9NRM2 450 aaPredicted RBP12.04□□□□□ -0.48
DDX41-209ENST00000508279 KDM2BQ8NHM5 1336 aa12.04□□□□□ -0.48
DDX41-209ENST00000508279 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 VAMP4O75379 141 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
DDX41-209ENST00000508279 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 C16orf71Q8IYS4 520 aaPredicted RBP12.03□□□□□ -0.48
DDX41-209ENST00000508279 RTKN2Q8IZC4 609 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
DDX41-209ENST00000508279 TMX4Q9H1E5 349 aaPredicted RBP12.03□□□□□ -0.48
DDX41-209ENST00000508279 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
DDX41-209ENST00000508279 CCER2I3L3R5 266 aa12.02□□□□□ -0.49
DDX41-209ENST00000508279 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.49
DDX41-209ENST00000508279 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
DDX41-209ENST00000508279 FKBP4Q02790 459 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX41-209ENST00000508279 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
DDX41-209ENST00000508279 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
DDX41-209ENST00000508279 KSR2Q6VAB6 950 aa12.02□□□□□ -0.49
DDX41-209ENST00000508279 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
DDX41-209ENST00000508279 CWC25Q9NXE8 425 aaPredicted RBP12.02□□□□□ -0.49
DDX41-209ENST00000508279 ABCC4O15439 1325 aa12.02□□□□□ -0.49
DDX41-209ENST00000508279 KIF3CO14782 793 aa12.01□□□□□ -0.49
DDX41-209ENST00000508279 FLIIQ13045 1269 aa12.01□□□□□ -0.49
DDX41-209ENST00000508279 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
DDX41-209ENST00000508279 MIER1Q8N108 512 aa12.01□□□□□ -0.49
DDX41-209ENST00000508279 CCDC85AQ96PX6 553 aaPredicted RBP12.01□□□□□ -0.49
DDX41-209ENST00000508279 LTBP3Q9NS15 1303 aa12.01□□□□□ -0.49
DDX41-209ENST00000508279 GLTPD2A6NH11 291 aa12□□□□□ -0.49
DDX41-209ENST00000508279 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
DDX41-209ENST00000508279 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
DDX41-209ENST00000508279 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
DDX41-209ENST00000508279 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
DDX41-209ENST00000508279 MYH3P11055 1940 aa11.99□□□□□ -0.49
DDX41-209ENST00000508279 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
DDX41-209ENST00000508279 GRAPQ13588 217 aa11.99□□□□□ -0.49
DDX41-209ENST00000508279 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
DDX41-209ENST00000508279 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
DDX41-209ENST00000508279 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
DDX41-209ENST00000508279 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
DDX41-209ENST00000508279 SPEF2Q9C093 1822 aa11.98□□□□□ -0.49
DDX41-209ENST00000508279 E9PSI1 815 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms