RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ZNF853P0CG23 659 aa18.6■□□□□ 0.57
RAB28-205ENST00000508274 C3orf67Q6ZVT6 689 aa18.6■□□□□ 0.57
RAB28-205ENST00000508274 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
RAB28-205ENST00000508274 LAMB2P55268 1798 aa18.6■□□□□ 0.57
RAB28-205ENST00000508274 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 WDR90Q96KV7 1748 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 HOXB7P09629 217 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 RBM46Q8TBY0 533 aaKnown RBP18.59■□□□□ 0.57
RAB28-205ENST00000508274 SNED1Q8TER0 1413 aa18.59■□□□□ 0.57
RAB28-205ENST00000508274 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
RAB28-205ENST00000508274 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
RAB28-205ENST00000508274 IFT57Q9NWB7 429 aa18.58■□□□□ 0.56
RAB28-205ENST00000508274 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB28-205ENST00000508274 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
RAB28-205ENST00000508274 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
RAB28-205ENST00000508274 ZNF277Q9NRM2 450 aaPredicted RBP18.57■□□□□ 0.56
RAB28-205ENST00000508274 POTECB2RU33 542 aa18.56■□□□□ 0.56
RAB28-205ENST00000508274 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
RAB28-205ENST00000508274 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
RAB28-205ENST00000508274 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
RAB28-205ENST00000508274 GNAI1P63096 354 aa18.55■□□□□ 0.56
RAB28-205ENST00000508274 TCIRG1Q13488 830 aa18.55■□□□□ 0.56
RAB28-205ENST00000508274 HSP90AB3PQ58FF7 597 aa18.55■□□□□ 0.56
RAB28-205ENST00000508274 DBF4Q9UBU7 674 aaPredicted RBP18.55■□□□□ 0.56
RAB28-205ENST00000508274 VEGFAP15692 232 aaPredicted RBP18.55■□□□□ 0.56
RAB28-205ENST00000508274 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
RAB28-205ENST00000508274 DPY19L2Q6NUT2 758 aa18.55■□□□□ 0.56
RAB28-205ENST00000508274 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
RAB28-205ENST00000508274 TAF1P21675 1872 aa18.54■□□□□ 0.56
RAB28-205ENST00000508274 DDNO94850 711 aaPredicted RBP18.54■□□□□ 0.56
RAB28-205ENST00000508274 RTKN2Q8IZC4 609 aa18.54■□□□□ 0.56
RAB28-205ENST00000508274 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
RAB28-205ENST00000508274 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
RAB28-205ENST00000508274 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
RAB28-205ENST00000508274 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
RAB28-205ENST00000508274 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
RAB28-205ENST00000508274 RBM17Q96I25 401 aaKnown RBP18.53■□□□□ 0.56
RAB28-205ENST00000508274 NLRP3Q96P20 1036 aa18.53■□□□□ 0.56
RAB28-205ENST00000508274 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
RAB28-205ENST00000508274 COL4A5P29400 1685 aa18.53■□□□□ 0.56
RAB28-205ENST00000508274 TCERG1O14776 1098 aaKnown RBP18.52■□□□□ 0.56
RAB28-205ENST00000508274 ANP32CO43423 234 aa18.52■□□□□ 0.56
RAB28-205ENST00000508274 APLP1P51693 650 aa18.52■□□□□ 0.56
RAB28-205ENST00000508274 FSTL1Q12841 308 aa18.52■□□□□ 0.56
RAB28-205ENST00000508274 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
RAB28-205ENST00000508274 CRAMP1Q96RY5 1269 aa18.52■□□□□ 0.56
RAB28-205ENST00000508274 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.55
RAB28-205ENST00000508274 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.55
RAB28-205ENST00000508274 PPEF1O14829 653 aaPredicted RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 IARSP41252 1262 aaKnown RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
RAB28-205ENST00000508274 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
RAB28-205ENST00000508274 HTRA3P83110 453 aa18.51■□□□□ 0.55
RAB28-205ENST00000508274 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 TSPYL6Q8N831 410 aa18.51■□□□□ 0.55
RAB28-205ENST00000508274 SMC1BQ8NDV3 1235 aa18.51■□□□□ 0.55
RAB28-205ENST00000508274 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
RAB28-205ENST00000508274 ABCC4O15439 1325 aa18.5■□□□□ 0.55
RAB28-205ENST00000508274 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
RAB28-205ENST00000508274 PSMD1Q99460 953 aa18.5■□□□□ 0.55
RAB28-205ENST00000508274 ISCA1Q9BUE6 129 aa18.5■□□□□ 0.55
RAB28-205ENST00000508274 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
RAB28-205ENST00000508274 CC2D2BQ6DHV5 1058 aa18.48■□□□□ 0.55
RAB28-205ENST00000508274 SCN4AP35499 1836 aa18.48■□□□□ 0.55
RAB28-205ENST00000508274 COL4A1P02462 1669 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 FAM89AQ96GI7 184 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 PCNTO95613 3336 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 POTEIP0CG38 1075 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
RAB28-205ENST00000508274 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
RAB28-205ENST00000508274 FZD9O00144 591 aa18.46■□□□□ 0.55
RAB28-205ENST00000508274 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
RAB28-205ENST00000508274 DNAJC5GQ8N7S2 189 aa18.46■□□□□ 0.55
RAB28-205ENST00000508274 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
RAB28-205ENST00000508274 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
RAB28-205ENST00000508274 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
RAB28-205ENST00000508274 LRRC37AA6NMS7 1700 aa18.44■□□□□ 0.54
RAB28-205ENST00000508274 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
RAB28-205ENST00000508274 GRAPQ13588 217 aa18.43■□□□□ 0.54
RAB28-205ENST00000508274 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
RAB28-205ENST00000508274 GRAPLQ8TC17 118 aaPredicted RBP18.43■□□□□ 0.54
RAB28-205ENST00000508274 JDP2Q8WYK2 163 aa18.43■□□□□ 0.54
RAB28-205ENST00000508274 MYD88Q99836 296 aa18.43■□□□□ 0.54
RAB28-205ENST00000508274 TRIM28Q13263 835 aaKnown RBP18.42■□□□□ 0.54
RAB28-205ENST00000508274 GRIPAP1Q4V328 841 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
RAB28-205ENST00000508274 LTBP1Q14766 1721 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 DUOX1Q9NRD9 1551 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 IQCA1LA6NCM1 817 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 AOC3Q16853 763 aa18.42■□□□□ 0.54
RAB28-205ENST00000508274 ADAMTSL1Q8N6G6 1762 aa18.41■□□□□ 0.54
RAB28-205ENST00000508274 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms