RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
PTPN13-206ENST00000507902 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
PTPN13-206ENST00000507902 NPR1P16066 1061 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 YY1P25490 414 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
PTPN13-206ENST00000507902 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
PTPN13-206ENST00000507902 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
PTPN13-206ENST00000507902 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 ABCC12Q96J65 1359 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
PTPN13-206ENST00000507902 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
PTPN13-206ENST00000507902 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
PTPN13-206ENST00000507902 ALDH1B1P30837 517 aa17.71■□□□□ 0.43
PTPN13-206ENST00000507902 FLIIQ13045 1269 aa17.71■□□□□ 0.43
PTPN13-206ENST00000507902 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
PTPN13-206ENST00000507902 NLRP3Q96P20 1036 aa17.71■□□□□ 0.43
PTPN13-206ENST00000507902 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPN13-206ENST00000507902 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-206ENST00000507902 CRY2Q49AN0 593 aa17.7■□□□□ 0.42
PTPN13-206ENST00000507902 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
PTPN13-206ENST00000507902 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-206ENST00000507902 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
PTPN13-206ENST00000507902 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
PTPN13-206ENST00000507902 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
PTPN13-206ENST00000507902 SLC10A5Q5PT55 438 aa17.69■□□□□ 0.42
PTPN13-206ENST00000507902 ARHGAP27Q6ZUM4 889 aa17.69■□□□□ 0.42
PTPN13-206ENST00000507902 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
PTPN13-206ENST00000507902 MYD88Q99836 296 aa17.69■□□□□ 0.42
PTPN13-206ENST00000507902 ATP5J2-PTCD1G3V325 749 aa17.68■□□□□ 0.42
PTPN13-206ENST00000507902 CACNA1SQ13698 1873 aa17.68■□□□□ 0.42
PTPN13-206ENST00000507902 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
PTPN13-206ENST00000507902 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
PTPN13-206ENST00000507902 LAMB2P55268 1798 aa17.68■□□□□ 0.42
PTPN13-206ENST00000507902 ADCY9O60503 1353 aa17.67■□□□□ 0.42
PTPN13-206ENST00000507902 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
PTPN13-206ENST00000507902 RBM17Q96I25 401 aaKnown RBP17.67■□□□□ 0.42
PTPN13-206ENST00000507902 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
PTPN13-206ENST00000507902 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
PTPN13-206ENST00000507902 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
PTPN13-206ENST00000507902 G2E3Q7L622 706 aa17.65■□□□□ 0.42
PTPN13-206ENST00000507902 DNAAF4Q8WXU2 420 aa17.65■□□□□ 0.42
PTPN13-206ENST00000507902 CRAMP1Q96RY5 1269 aa17.65■□□□□ 0.42
PTPN13-206ENST00000507902 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
PTPN13-206ENST00000507902 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
PTPN13-206ENST00000507902 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-206ENST00000507902 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
PTPN13-206ENST00000507902 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
PTPN13-206ENST00000507902 PTPRCP08575 1304 aa17.64■□□□□ 0.41
PTPN13-206ENST00000507902 ZBED9Q6R2W3 1325 aa17.64■□□□□ 0.41
PTPN13-206ENST00000507902 SLX4Q8IY92 1834 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 IRS4O14654 1257 aaPredicted RBP17.63■□□□□ 0.41
PTPN13-206ENST00000507902 C21orf2O43822 256 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 LINS1Q8NG48 757 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 FAM89AQ96GI7 184 aa17.63■□□□□ 0.41
PTPN13-206ENST00000507902 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
PTPN13-206ENST00000507902 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
PTPN13-206ENST00000507902 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
PTPN13-206ENST00000507902 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
PTPN13-206ENST00000507902 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
PTPN13-206ENST00000507902 LTBP3Q9NS15 1303 aa17.62■□□□□ 0.41
PTPN13-206ENST00000507902 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
PTPN13-206ENST00000507902 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
PTPN13-206ENST00000507902 NEURL1BA8MQ27 555 aa17.61■□□□□ 0.41
PTPN13-206ENST00000507902 LMNB1P20700 586 aa17.61■□□□□ 0.41
PTPN13-206ENST00000507902 TMC4Q7Z404 712 aa17.61■□□□□ 0.41
PTPN13-206ENST00000507902 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
PTPN13-206ENST00000507902 PPEF1O14829 653 aaPredicted RBP17.6■□□□□ 0.41
PTPN13-206ENST00000507902 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
PTPN13-206ENST00000507902 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
PTPN13-206ENST00000507902 ABCC4O15439 1325 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 PDE8AO60658 829 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 BBOX1O75936 387 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
PTPN13-206ENST00000507902 CCDC152Q4G0S7 254 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
PTPN13-206ENST00000507902 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
PTPN13-206ENST00000507902 SSH1Q8WYL5 1049 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
PTPN13-206ENST00000507902 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
PTPN13-206ENST00000507902 GCKRQ14397 625 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 C3orf67Q6ZVT6 689 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 C7orf43Q8WVR3 580 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 SBF1O95248 1867 aa17.58■□□□□ 0.4
PTPN13-206ENST00000507902 MYH3P11055 1940 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 NFKBIEO00221 500 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 ALDH1L1O75891 902 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 RASSF7Q02833 373 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 GRAPQ13588 217 aa17.57■□□□□ 0.4
PTPN13-206ENST00000507902 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms