RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NEURL1BA8MQ27 555 aa25.36■■□□□ 1.65
USP53-203ENST00000507597 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
USP53-203ENST00000507597 PPP1R1BQ9UD71 204 aaPredicted RBP25.36■■□□□ 1.65
USP53-203ENST00000507597 SUSD4Q5VX71 490 aa25.35■■□□□ 1.65
USP53-203ENST00000507597 ARFGEF2Q9Y6D5 1785 aa25.35■■□□□ 1.65
USP53-203ENST00000507597 FAM177BA6PVY3 158 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 IGKV5-2P06315 115 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 DDR1Q08345 913 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 PDE3AQ14432 1141 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 ZBTB38Q8NAP3 1195 aaPredicted RBP25.34■■□□□ 1.65
USP53-203ENST00000507597 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
USP53-203ENST00000507597 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 UBN2Q6ZU65 1347 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
USP53-203ENST00000507597 GCKRQ14397 625 aa25.33■■□□□ 1.65
USP53-203ENST00000507597 CWF19L2Q2TBE0 894 aaKnown RBP25.33■■□□□ 1.65
USP53-203ENST00000507597 INTS3Q68E01 1043 aaKnown RBP25.33■■□□□ 1.65
USP53-203ENST00000507597 CLUAP1Q96AJ1 413 aa25.33■■□□□ 1.65
USP53-203ENST00000507597 ABCC4O15439 1325 aa25.33■■□□□ 1.64
USP53-203ENST00000507597 PCCAP05165 728 aaPredicted RBP25.32■■□□□ 1.64
USP53-203ENST00000507597 PTGER2P43116 358 aa25.32■■□□□ 1.64
USP53-203ENST00000507597 SGIP1Q9BQI5 828 aa25.32■■□□□ 1.64
USP53-203ENST00000507597 NTSR2O95665 410 aa25.31■■□□□ 1.64
USP53-203ENST00000507597 ANKRD36CQ5JPF3 1778 aa25.31■■□□□ 1.64
USP53-203ENST00000507597 RRP1P56182 461 aaKnown RBP25.3■■□□□ 1.64
USP53-203ENST00000507597 PRR5LQ6MZQ0 368 aa25.3■■□□□ 1.64
USP53-203ENST00000507597 PDE6BP35913 854 aa25.29■■□□□ 1.64
USP53-203ENST00000507597 BRIP1Q9BX63 1249 aa25.29■■□□□ 1.64
USP53-203ENST00000507597 GRM8O00222 908 aa25.28■■□□□ 1.64
USP53-203ENST00000507597 GNAI3P08754 354 aa25.28■■□□□ 1.64
USP53-203ENST00000507597 NLRP3Q96P20 1036 aa25.28■■□□□ 1.64
USP53-203ENST00000507597 CD2APQ9Y5K6 639 aa25.28■■□□□ 1.64
USP53-203ENST00000507597 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
USP53-203ENST00000507597 H7C1W4 665 aa25.27■■□□□ 1.64
USP53-203ENST00000507597 PLIN1O60240 522 aa25.27■■□□□ 1.64
USP53-203ENST00000507597 SLC10A5Q5PT55 438 aa25.27■■□□□ 1.64
USP53-203ENST00000507597 FAM89AQ96GI7 184 aa25.27■■□□□ 1.64
USP53-203ENST00000507597 CDHR2Q9BYE9 1310 aa25.27■■□□□ 1.64
USP53-203ENST00000507597 IRS4O14654 1257 aaPredicted RBP25.26■■□□□ 1.63
USP53-203ENST00000507597 ERFEQ4G0M1 354 aa25.26■■□□□ 1.63
USP53-203ENST00000507597 NUTM1Q86Y26 1132 aa25.26■■□□□ 1.63
USP53-203ENST00000507597 ITPRIPQ8IWB1 547 aa25.26■■□□□ 1.63
USP53-203ENST00000507597 TMEM57Q8N5G2 664 aa25.26■■□□□ 1.63
USP53-203ENST00000507597 TGFB2P61812 414 aa25.25■■□□□ 1.63
USP53-203ENST00000507597 DDX19BQ9UMR2 479 aa25.25■■□□□ 1.63
USP53-203ENST00000507597 SUPT16HQ9Y5B9 1047 aaKnown RBP25.25■■□□□ 1.63
USP53-203ENST00000507597 UBE3BQ7Z3V4 1068 aa25.24■■□□□ 1.63
USP53-203ENST00000507597 KLHL34Q8N239 644 aa25.24■■□□□ 1.63
USP53-203ENST00000507597 PDE8AO60658 829 aa25.23■■□□□ 1.63
USP53-203ENST00000507597 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
USP53-203ENST00000507597 RIC1Q4ADV7 1423 aa25.22■■□□□ 1.63
USP53-203ENST00000507597 UTYO14607 1347 aa25.22■■□□□ 1.63
USP53-203ENST00000507597 H0YIN7 160 aa25.22■■□□□ 1.63
USP53-203ENST00000507597 MVPQ14764 893 aaKnown RBP25.22■■□□□ 1.63
USP53-203ENST00000507597 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
USP53-203ENST00000507597 PANK1Q8TE04 598 aa25.22■■□□□ 1.63
USP53-203ENST00000507597 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
USP53-203ENST00000507597 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
USP53-203ENST00000507597 C10orf71Q711Q0 1435 aa25.2■■□□□ 1.63
USP53-203ENST00000507597 NRXN2Q9P2S2 1712 aa25.2■■□□□ 1.63
USP53-203ENST00000507597 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
USP53-203ENST00000507597 TNNQ9UQP3 1299 aa25.2■■□□□ 1.62
USP53-203ENST00000507597 HCLS1P14317 486 aaPredicted RBP25.19■■□□□ 1.62
USP53-203ENST00000507597 RPGRQ92834 1020 aaKnown RBP25.19■■□□□ 1.62
USP53-203ENST00000507597 SRCAPQ6ZRS2 3230 aa25.19■■□□□ 1.62
USP53-203ENST00000507597 RLBP1P12271 317 aa25.18■■□□□ 1.62
USP53-203ENST00000507597 CCDC152Q4G0S7 254 aa25.18■■□□□ 1.62
USP53-203ENST00000507597 COG6Q9Y2V7 657 aa25.18■■□□□ 1.62
USP53-203ENST00000507597 KLRG2A4D1S0 409 aaPredicted RBP25.17■■□□□ 1.62
USP53-203ENST00000507597 ALDH1B1P30837 517 aa25.17■■□□□ 1.62
USP53-203ENST00000507597 C2CD5Q86YS7 1000 aa25.17■■□□□ 1.62
USP53-203ENST00000507597 CCDC24Q8N4L8 307 aa25.17■■□□□ 1.62
USP53-203ENST00000507597 LRP5O75197 1615 aa25.16■■□□□ 1.62
USP53-203ENST00000507597 GNAI2P04899 355 aa25.16■■□□□ 1.62
USP53-203ENST00000507597 NBPF7P0C2Y1 421 aaPredicted RBP25.16■■□□□ 1.62
USP53-203ENST00000507597 NPR1P16066 1061 aa25.16■■□□□ 1.62
USP53-203ENST00000507597 CASP7P55210 303 aa25.16■■□□□ 1.62
USP53-203ENST00000507597 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
USP53-203ENST00000507597 MASTLQ96GX5 879 aa25.16■■□□□ 1.62
USP53-203ENST00000507597 RBM17Q96I25 401 aaKnown RBP25.16■■□□□ 1.62
USP53-203ENST00000507597 FHDC1Q9C0D6 1143 aaPredicted RBP25.16■■□□□ 1.62
USP53-203ENST00000507597 CTSWP56202 376 aa25.15■■□□□ 1.62
USP53-203ENST00000507597 AAMPQ13685 434 aa25.15■■□□□ 1.62
USP53-203ENST00000507597 DDX46Q7L014 1031 aaKnown RBP25.15■■□□□ 1.62
USP53-203ENST00000507597 SYNE4Q8N205 404 aa25.15■■□□□ 1.62
USP53-203ENST00000507597 JARID2Q92833 1246 aaPredicted RBP25.15■■□□□ 1.62
USP53-203ENST00000507597 ABCC12Q96J65 1359 aa25.15■■□□□ 1.62
USP53-203ENST00000507597 N4BP2Q86UW6 1770 aaPredicted RBP25.14■■□□□ 1.62
USP53-203ENST00000507597 ZBTB7BO15156 539 aaPredicted RBP25.14■■□□□ 1.62
USP53-203ENST00000507597 STYK1Q6J9G0 422 aa25.14■■□□□ 1.62
USP53-203ENST00000507597 CNKSR1Q969H4 720 aa25.14■■□□□ 1.62
USP53-203ENST00000507597 MEIS3Q99687 375 aa25.14■■□□□ 1.62
USP53-203ENST00000507597 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
USP53-203ENST00000507597 ZNF622Q969S3 477 aaKnown RBP eCLIP25.13■■□□□ 1.61
USP53-203ENST00000507597 SRGNP10124 158 aa25.12■■□□□ 1.61
USP53-203ENST00000507597 C20orf194Q5TEA3 1177 aa25.12■■□□□ 1.61
USP53-203ENST00000507597 SUCLG2Q96I99 432 aa25.12■■□□□ 1.61
USP53-203ENST00000507597 SYT17Q9BSW7 474 aa25.12■■□□□ 1.61
USP53-203ENST00000507597 TMX4Q9H1E5 349 aaPredicted RBP25.12■■□□□ 1.61
USP53-203ENST00000507597 CRAMP1Q96RY5 1269 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms