RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
CCHCR1-222ENST00000507459 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-222ENST00000507459 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
CCHCR1-222ENST00000507459 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-222ENST00000507459 CACNA1SQ13698 1873 aa18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 CCER2I3L3R5 266 aa18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 GPBP1L1Q9HC44 474 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
CCHCR1-222ENST00000507459 TNRC6CQ9HCJ0 1690 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-222ENST00000507459 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
CCHCR1-222ENST00000507459 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 NFKBIEO00221 500 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 CRY2Q49AN0 593 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 ISCA1Q9BUE6 129 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
CCHCR1-222ENST00000507459 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 LMNB1P20700 586 aa18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 MYD88Q99836 296 aa18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 SH3TC1Q8TE82 1336 aa18.18■□□□□ 0.5
CCHCR1-222ENST00000507459 VAMP4O75379 141 aa18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 PRELPP51888 382 aa18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 RBM17Q96I25 401 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-222ENST00000507459 SBF1O95248 1867 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 G2E3Q7L622 706 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 C7orf43Q8WVR3 580 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 TAOK3Q9H2K8 898 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 MAP3K2Q9Y2U5 619 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
CCHCR1-222ENST00000507459 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 HOXA10P31260 410 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
CCHCR1-222ENST00000507459 TRIM28Q13263 835 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-222ENST00000507459 KSR2Q6VAB6 950 aa18.14■□□□□ 0.49
CCHCR1-222ENST00000507459 MIER1Q8N108 512 aa18.14■□□□□ 0.49
CCHCR1-222ENST00000507459 METTL22Q9BUU2 404 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-222ENST00000507459 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
CCHCR1-222ENST00000507459 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
CCHCR1-222ENST00000507459 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
CCHCR1-222ENST00000507459 FLIIQ13045 1269 aa18.12■□□□□ 0.49
CCHCR1-222ENST00000507459 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
CCHCR1-222ENST00000507459 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-222ENST00000507459 IRS4O14654 1257 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 PPEF1O14829 653 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 FKBP5Q13451 457 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 CCDC191Q8NCU4 936 aa18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 LTBP3Q9NS15 1303 aa18.11■□□□□ 0.49
CCHCR1-222ENST00000507459 ABCC4O15439 1325 aa18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 NEXNQ0ZGT2 675 aa18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 SLC51AQ86UW1 340 aa18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 ZNF277Q9NRM2 450 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-222ENST00000507459 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
CCHCR1-222ENST00000507459 E9PSI1 815 aa18.09■□□□□ 0.49
CCHCR1-222ENST00000507459 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
CCHCR1-222ENST00000507459 TMX4Q9H1E5 349 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-222ENST00000507459 ZC3H4Q9UPT8 1303 aaKnown RBP18.08■□□□□ 0.49
CCHCR1-222ENST00000507459 IGKV5-2P06315 115 aa18.08■□□□□ 0.48
CCHCR1-222ENST00000507459 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-222ENST00000507459 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
CCHCR1-222ENST00000507459 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
CCHCR1-222ENST00000507459 LAMB2P55268 1798 aa18.08■□□□□ 0.48
CCHCR1-222ENST00000507459 KIF3CO14782 793 aa18.07■□□□□ 0.48
CCHCR1-222ENST00000507459 BBOX1O75936 387 aa18.07■□□□□ 0.48
CCHCR1-222ENST00000507459 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-222ENST00000507459 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
CCHCR1-222ENST00000507459 RRAGCQ9HB90 399 aa18.07■□□□□ 0.48
CCHCR1-222ENST00000507459 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 GRAPQ13588 217 aa18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 SF3B3Q15393 1217 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 DNAAF4Q8WXU2 420 aa18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 ATP6V0A2Q9Y487 856 aa18.06■□□□□ 0.48
CCHCR1-222ENST00000507459 NEURL1BA8MQ27 555 aa18.05■□□□□ 0.48
CCHCR1-222ENST00000507459 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-222ENST00000507459 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-222ENST00000507459 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
CCHCR1-222ENST00000507459 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms