RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 ABCC8Q09428 1581 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 RASA1P20936 1047 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 RFX1P22670 979 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 HIRAP54198 1017 aaPredicted RBP9.93□□□□□ -0.82
SMN2-207ENST00000507458 TSEN2Q8NCE0 465 aaKnown RBP9.93□□□□□ -0.82
SMN2-207ENST00000507458 ANKIB1Q9P2G1 1089 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
SMN2-207ENST00000507458 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
SMN2-207ENST00000507458 SYT9Q86SS6 491 aa9.92□□□□□ -0.82
SMN2-207ENST00000507458 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
SMN2-207ENST00000507458 ARID3AQ99856 593 aa9.92□□□□□ -0.82
SMN2-207ENST00000507458 HCN4Q9Y3Q4 1203 aa9.92□□□□□ -0.82
SMN2-207ENST00000507458 ELOA3CA0A087WX78 387 aaPredicted RBP9.91□□□□□ -0.82
SMN2-207ENST00000507458 ELOA3DA6NLF2 546 aaPredicted RBP9.91□□□□□ -0.82
SMN2-207ENST00000507458 SFI1A8K8P3 1242 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 ATG7O95352 703 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 ALAS2P22557 587 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 ELOAQ14241 798 aaKnown RBP9.91□□□□□ -0.82
SMN2-207ENST00000507458 ELOA3BQ3SY89 546 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 ELOA3Q8NG57 546 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 PHACTR1Q9C0D0 580 aa9.91□□□□□ -0.82
SMN2-207ENST00000507458 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L15C9J2P7 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L13C9JLJ4 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L12C9JPN9 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L11C9JVI0 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L21D6R901 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L18D6R9N7 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L22D6RA61 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L17D6RBQ6 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L19D6RCP7 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L20D6RJB6 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.82
SMN2-207ENST00000507458 USP17L24Q0WX57 530 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 CEP63Q96MT8 703 aa9.9□□□□□ -0.82
SMN2-207ENST00000507458 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
SMN2-207ENST00000507458 ARHGEF11O15085 1522 aa9.89□□□□□ -0.83
SMN2-207ENST00000507458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
SMN2-207ENST00000507458 SEC13P55735 322 aa9.89□□□□□ -0.83
SMN2-207ENST00000507458 SFSWAPQ12872 951 aaKnown RBP9.89□□□□□ -0.83
SMN2-207ENST00000507458 HSH2DQ96JZ2 352 aa9.89□□□□□ -0.83
SMN2-207ENST00000507458 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
SMN2-207ENST00000507458 AQRO60306 1485 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMN2-207ENST00000507458 SIN3BO75182 1162 aa9.88□□□□□ -0.83
SMN2-207ENST00000507458 PDE4CQ08493 712 aa9.88□□□□□ -0.83
SMN2-207ENST00000507458 PTK7Q13308 1070 aa9.88□□□□□ -0.83
SMN2-207ENST00000507458 TARBP1Q13395 1621 aaKnown RBP9.88□□□□□ -0.83
SMN2-207ENST00000507458 ATAD2Q6PL18 1390 aa9.88□□□□□ -0.83
SMN2-207ENST00000507458 ADAM23O75077 832 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 DKK1O94907 266 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 CYB5RLQ6IPT4 315 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 ANKMY2Q8IV38 441 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 GAS2L2Q8NHY3 880 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
SMN2-207ENST00000507458 C21orf2O43822 256 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 BAG6P46379 1132 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 HIF1AQ16665 826 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 ALDH16A1Q8IZ83 802 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 STAG2Q8N3U4 1231 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
SMN2-207ENST00000507458 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
SMN2-207ENST00000507458 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
SMN2-207ENST00000507458 ADARB2-AS1A8MUL3 147 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 C1QTNF9BB2RNN3 333 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 TYRO3Q06418 890 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 CRTC2Q53ET0 693 aaPredicted RBP9.85□□□□□ -0.83
SMN2-207ENST00000507458 ZNF280CQ8ND82 737 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 FAM200AQ8TCP9 573 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 CHMP7Q8WUX9 453 aaPredicted RBP9.85□□□□□ -0.83
SMN2-207ENST00000507458 MDFIQ99750 246 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 PLVAPQ9BX97 442 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 KCNH4Q9UQ05 1017 aa9.85□□□□□ -0.83
SMN2-207ENST00000507458 KCNQ4P56696 695 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 ARXQ96QS3 562 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 HINFPQ9BQA5 517 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 C2orf49Q9BVC5 232 aaPredicted RBP9.84□□□□□ -0.83
SMN2-207ENST00000507458 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
SMN2-207ENST00000507458 CHD1O14646 1710 aa9.84□□□□□ -0.83
SMN2-207ENST00000507458 SOGA1O94964 1423 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 K7ELQ4 463 aaPredicted RBP9.83□□□□□ -0.84
SMN2-207ENST00000507458 SWI5Q1ZZU3 235 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 RAD54L2Q9Y4B4 1467 aa9.83□□□□□ -0.84
SMN2-207ENST00000507458 ADH7P40394 386 aa9.82□□□□□ -0.84
SMN2-207ENST00000507458 DPYDQ12882 1025 aa9.82□□□□□ -0.84
SMN2-207ENST00000507458 RAB44Q7Z6P3 723 aaPredicted RBP9.82□□□□□ -0.84
SMN2-207ENST00000507458 TDRD9Q8NDG6 1382 aaKnown RBP9.82□□□□□ -0.84
SMN2-207ENST00000507458 M0R082 166 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 SPATA31C1P0DKV0 1188 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 CHRNA4P43681 627 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 BTLAQ7Z6A9 289 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms