RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
SNF8-205ENST00000507302 NYXQ9GZU5 481 aa21.97■■□□□ 1.11
SNF8-205ENST00000507302 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
SNF8-205ENST00000507302 ABHD8Q96I13 439 aa21.96■■□□□ 1.11
SNF8-205ENST00000507302 NUDCQ9Y266 331 aa21.96■■□□□ 1.11
SNF8-205ENST00000507302 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
SNF8-205ENST00000507302 FAM177BA6PVY3 158 aa21.94■■□□□ 1.1
SNF8-205ENST00000507302 SLC34A2O95436 690 aa21.94■■□□□ 1.1
SNF8-205ENST00000507302 EIF6P56537 245 aaKnown RBP21.94■■□□□ 1.1
SNF8-205ENST00000507302 CRAMP1Q96RY5 1269 aa21.94■■□□□ 1.1
SNF8-205ENST00000507302 MAP3K15Q6ZN16 1313 aa21.94■■□□□ 1.1
SNF8-205ENST00000507302 EPS15P42566 896 aa21.93■■□□□ 1.1
SNF8-205ENST00000507302 CST9Q5W186 159 aa21.93■■□□□ 1.1
SNF8-205ENST00000507302 UBN2Q6ZU65 1347 aa21.93■■□□□ 1.1
SNF8-205ENST00000507302 USP50Q70EL3 339 aaPredicted RBP21.93■■□□□ 1.1
SNF8-205ENST00000507302 NUTM1Q86Y26 1132 aa21.93■■□□□ 1.1
SNF8-205ENST00000507302 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
SNF8-205ENST00000507302 GTF2E1P29083 439 aaPredicted RBP21.92■■□□□ 1.1
SNF8-205ENST00000507302 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNF8-205ENST00000507302 ABT1Q9ULW3 272 aaKnown RBP21.92■■□□□ 1.1
SNF8-205ENST00000507302 PPP2R1AP30153 589 aa21.91■■□□□ 1.1
SNF8-205ENST00000507302 RGS19P49795 217 aa21.91■■□□□ 1.1
SNF8-205ENST00000507302 FMR1Q06787 632 aaKnown RBP eCLIP21.91■■□□□ 1.1
SNF8-205ENST00000507302 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
SNF8-205ENST00000507302 CAPNS2Q96L46 248 aa21.91■■□□□ 1.1
SNF8-205ENST00000507302 VPS33BQ9H267 617 aa21.91■■□□□ 1.1
SNF8-205ENST00000507302 LMOD1P29536 600 aaPredicted RBP21.9■■□□□ 1.1
SNF8-205ENST00000507302 TTLL7Q6ZT98 887 aa21.9■■□□□ 1.1
SNF8-205ENST00000507302 GJA3Q9Y6H8 435 aa21.9■■□□□ 1.1
SNF8-205ENST00000507302 TLL2Q9Y6L7 1015 aa21.9■■□□□ 1.1
SNF8-205ENST00000507302 NTSR2O95665 410 aa21.89■■□□□ 1.09
SNF8-205ENST00000507302 ECE1P42892 770 aa21.89■■□□□ 1.09
SNF8-205ENST00000507302 SLC51AQ86UW1 340 aa21.89■■□□□ 1.09
SNF8-205ENST00000507302 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.09
SNF8-205ENST00000507302 RPGRQ92834 1020 aaKnown RBP21.89■■□□□ 1.09
SNF8-205ENST00000507302 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.09
SNF8-205ENST00000507302 EIF4A1P60842 406 aaKnown RBP21.88■■□□□ 1.09
SNF8-205ENST00000507302 SUSD4Q5VX71 490 aa21.88■■□□□ 1.09
SNF8-205ENST00000507302 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
SNF8-205ENST00000507302 PGAP2Q9UHJ9 254 aa21.88■■□□□ 1.09
SNF8-205ENST00000507302 MAP2K2P36507 400 aa21.87■■□□□ 1.09
SNF8-205ENST00000507302 CNGB1Q14028 1251 aaPredicted RBP21.87■■□□□ 1.09
SNF8-205ENST00000507302 RBM17Q96I25 401 aaKnown RBP21.87■■□□□ 1.09
SNF8-205ENST00000507302 GPR101Q96P66 508 aaPredicted RBP21.87■■□□□ 1.09
SNF8-205ENST00000507302 RTFDC1Q9BY42 306 aaPredicted RBP21.87■■□□□ 1.09
SNF8-205ENST00000507302 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
SNF8-205ENST00000507302 ERBB4Q15303 1308 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
SNF8-205ENST00000507302 SLC10A5Q5PT55 438 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 CYP4F22Q6NT55 531 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 GIGYF2Q6Y7W6 1299 aaKnown RBP21.86■■□□□ 1.09
SNF8-205ENST00000507302 C3orf67Q6ZVT6 689 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 HHIPL1Q96JK4 782 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 GPRC5DQ9NZD1 345 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 LAMB2P55268 1798 aa21.86■■□□□ 1.09
SNF8-205ENST00000507302 TRAF5O00463 557 aa21.85■■□□□ 1.09
SNF8-205ENST00000507302 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
SNF8-205ENST00000507302 KIF6Q6ZMV9 814 aa21.85■■□□□ 1.09
SNF8-205ENST00000507302 ADARB2Q9NS39 739 aaKnown RBP21.85■■□□□ 1.09
SNF8-205ENST00000507302 ATP6V0A2Q9Y487 856 aa21.85■■□□□ 1.09
SNF8-205ENST00000507302 GPTP24298 496 aa21.84■■□□□ 1.09
SNF8-205ENST00000507302 SAPCD2Q86UD0 394 aa21.84■■□□□ 1.09
SNF8-205ENST00000507302 NIM1KQ8IY84 436 aa21.84■■□□□ 1.09
SNF8-205ENST00000507302 PLEKHF1Q96S99 279 aa21.84■■□□□ 1.09
SNF8-205ENST00000507302 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
SNF8-205ENST00000507302 PARP10Q53GL7 1025 aa21.83■■□□□ 1.09
SNF8-205ENST00000507302 NGEFQ8N5V2 710 aa21.83■■□□□ 1.09
SNF8-205ENST00000507302 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.09
SNF8-205ENST00000507302 CXCL9Q07325 125 aa21.82■■□□□ 1.08
SNF8-205ENST00000507302 ZBTB3Q9H5J0 574 aa21.82■■□□□ 1.08
SNF8-205ENST00000507302 ZNRF3Q9ULT6 936 aa21.82■■□□□ 1.08
SNF8-205ENST00000507302 PPIP5K2O43314 1243 aa21.81■■□□□ 1.08
SNF8-205ENST00000507302 AOC3Q16853 763 aa21.81■■□□□ 1.08
SNF8-205ENST00000507302 PPP1R42Q7Z4L9 355 aa21.81■■□□□ 1.08
SNF8-205ENST00000507302 BEGAINQ9BUH8 593 aa21.81■■□□□ 1.08
SNF8-205ENST00000507302 CA12O43570 354 aa21.8■■□□□ 1.08
SNF8-205ENST00000507302 PDIA6Q15084 440 aa21.8■■□□□ 1.08
SNF8-205ENST00000507302 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
SNF8-205ENST00000507302 NLRP3Q96P20 1036 aa21.8■■□□□ 1.08
SNF8-205ENST00000507302 LRRC37AA6NMS7 1700 aa21.8■■□□□ 1.08
SNF8-205ENST00000507302 AOC2O75106 756 aa21.79■■□□□ 1.08
SNF8-205ENST00000507302 MYL6BP14649 208 aa21.79■■□□□ 1.08
SNF8-205ENST00000507302 SUPT20HQ8NEM7 779 aa21.79■■□□□ 1.08
SNF8-205ENST00000507302 ABCC4O15439 1325 aa21.79■■□□□ 1.08
SNF8-205ENST00000507302 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
SNF8-205ENST00000507302 TNRC18O15417 2968 aaPredicted RBP21.78■■□□□ 1.08
SNF8-205ENST00000507302 BRPF1P55201 1214 aaPredicted RBP21.78■■□□□ 1.08
SNF8-205ENST00000507302 MLLT1Q03111 559 aaPredicted RBP21.78■■□□□ 1.08
SNF8-205ENST00000507302 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
SNF8-205ENST00000507302 CASP8AP2Q9UKL3 1982 aa21.78■■□□□ 1.08
SNF8-205ENST00000507302 BBOX1O75936 387 aa21.77■■□□□ 1.08
SNF8-205ENST00000507302 HIRAP54198 1017 aaPredicted RBP21.77■■□□□ 1.08
SNF8-205ENST00000507302 KIAA2012Q0VF49 1180 aa21.77■■□□□ 1.08
SNF8-205ENST00000507302 NFE2L2Q16236 605 aa21.77■■□□□ 1.08
SNF8-205ENST00000507302 CELF2O95319 508 aaKnown RBP21.76■■□□□ 1.07
SNF8-205ENST00000507302 GMPSP49915 693 aaPredicted RBP21.76■■□□□ 1.07
SNF8-205ENST00000507302 PAXIP1Q6ZW49 1069 aaPredicted RBP21.76■■□□□ 1.07
SNF8-205ENST00000507302 TCERG1O14776 1098 aaKnown RBP21.75■■□□□ 1.07
SNF8-205ENST00000507302 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms